def test_gorule50():
a = "PMID:21873635"
assoc = make_annotation(db="HELLO", db_id="123", evidence="ISS", withfrom="HELLO:123").associations[0]
test_result = qc.GoRule50().test(assoc, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.WARNING
assoc.subject.id = Curie.from_str("BYE:567")
test_result = qc.GoRule50().test(assoc, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.PASS
# Not ISS, so fine to have repeated columns
assoc.subject.id = Curie.from_str("HELLO:123")
assoc.evidence.type = Curie.from_str("ECO:0000501")
test_result = qc.GoRule50().test(assoc, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.PASS
def test_gorule50():
a = ["blah"] * 16
a[6] = "ISS"
a[1] = "HELLO:123"
a[7] = "HELLO:123"
test_result = qc.GoRule50().test(a, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.WARNING
a[1] = "BYE:567"
test_result = qc.GoRule50().test(a, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.PASS
a[1] = "HELLO:123"
a[6] = "BLA"
# Not ISS, so fine to have repeated columns
test_result = qc.GoRule50().test(a, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.PASS
def test_gorule50():
a = ["blah"] * 15
a[0] = "HELLO"
a[1] = "123"
a[3] = ""
a[6] = "ISS"
a[7] = "HELLO:123"
a[8] = "P"
assoc = gafparser.to_association(a).associations[0]
test_result = qc.GoRule50().test(assoc, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.WARNING
assoc.subject.id = "BYE:567"
test_result = qc.GoRule50().test(assoc, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.PASS
a[1] = "HELLO:123"
a[6] = "ECO:0000501"
# Not ISS, so fine to have repeated columns
test_result = qc.GoRule50().test(assoc, assocparser.AssocParserConfig())
assert test_result.result_type == qc.ResultType.PASS