예제 #1
0
 def check_parse_errors(self, variables):
     # check the variables in the expression library as indexed by the list 'variables'.
     errors = []
     for (var_name, dataset_name, use, source, expr)  in variables:
         # special case -- the 'constant' expression always passes
         if expr.strip()=='constant' and var_name=='constant':
             continue
         try:
             n = VariableName(expr)
             # check that the expression is of the correct form given the source
             if source=='primary attribute':
                 if n.get_autogen_class() is not None:
                     errors.append("Error - this is parsing as an expression rather than as a primary attribute: (%s, %s): %s" % (var_name, dataset_name, expr))
                 elif n.get_dataset_name() is None:
                     errors.append("Error in primary attribute - missing dataset name: (%s, %s): %s" % (var_name, dataset_name, expr))
                 elif dataset_name!=n.get_dataset_name():
                     errors.append("Error in primary attribute - dataset name mismatch: (%s, %s): %s" % (var_name, dataset_name, expr))
                 elif n.get_package_name() is not None:
                     errors.append("Error in primary attribute - shouldn't have package name: (%s, %s): %s" % (var_name, dataset_name, expr))
             elif source=='expression':
                 if n.get_autogen_class() is None:
                     errors.append("Error - this doesn't seem to be an expression.  Maybe it should be a Python class or primary attribute?: (%s, %s): %s" % (var_name, dataset_name, expr))
             elif source=='Python class':
                 if n.get_autogen_class() is not None:
                     errors.append("Error - this is parsing as an expression rather than as a Python class reference: (%s, %s): %s" % (var_name, dataset_name, expr))
                 elif n.get_package_name() is None:
                     errors.append("Error - missing package name in Python class reference: (%s, %s): %s" % (var_name, dataset_name, expr))
                 elif n.get_dataset_name() is None:
                     errors.append("Error - missing dataset name in Python class reference: (%s, %s): %s" % (var_name, dataset_name, expr))
                 elif dataset_name!=n.get_dataset_name():
                     errors.append("Error - dataset name  mismatch in Python class reference: (%s, %s): %s" % (var_name, dataset_name, expr))
             else:
                 errors.append("Unknown source type %s: (%s, %s): %s" % (source, var_name, dataset_name, expr))
         except (SyntaxError, ValueError), e:
             errors.append("Parsing error: (%s, %s): %s" % (var_name, dataset_name, str(e)))
예제 #2
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 def test_alias_fully_qualified_variable(self):
     expr = "x = opus_core.tests.a_test_variable"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='tests',
                         table_data={
                             "a_dependent_variable": array([1, 5, 10]),
                             "id": array([1, 3, 4])
                         })
     dataset = Dataset(in_storage=storage,
                       in_table_name='tests',
                       id_name="id",
                       dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([10, 50, 100])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6),
                  "Error in test_alias_fully_qualified_variable")
     # check that the new var has x as an alias
     v = VariableName(expr)
     self.assertEqual(v.get_package_name(),
                      None,
                      msg="bad value for package_name")
     self.assertEqual(v.get_dataset_name(),
                      'tests',
                      msg="bad value for dataset_name")
     self.assert_(v.get_short_name().startswith('autogen'),
                  msg="bad value for shortname")
     self.assertEqual(v.get_alias(), 'x', msg="bad value for alias")
     self.assertNotEqual(v.get_autogen_class(),
                         None,
                         msg="bad value for autogen_class")
     # check that the alias has the correct value
     result2 = dataset.compute_variables(['x'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6),
                  "Error in accessing a_test_variable")
예제 #3
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 def test_fully_qualified_variable(self):
     # this tests an expression consisting of a fully-qualified variable
     expr = "opus_core.test_agent.income_times_2"
     storage = StorageFactory().get_storage("dict_storage")
     storage.write_table(table_name="test_agents", table_data={"income": array([1, 5, 10]), "id": array([1, 3, 4])})
     dataset = Dataset(in_storage=storage, in_table_name="test_agents", id_name="id", dataset_name="test_agent")
     result = dataset.compute_variables([expr])
     should_be = array([2, 10, 20])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6), "Error in test_fully_qualified_variable")
     # check that expr is in the cache of known expressions
     # (normally we shouldn't be accessing this private field, but just this once ...)
     cache = VariableName._cache
     self.assert_(expr in cache, msg="did not find expr in cache")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(), "opus_core", msg="bad value for package")
     self.assertEqual(name.get_dataset_name(), "test_agent", msg="bad value for dataset")
     self.assertEqual(name.get_short_name(), "income_times_2", msg="bad value for shortname")
     self.assertEqual(name.get_alias(), "income_times_2", msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(), None, msg="bad value for autogen_class")
     # test that the variable can now also be accessed using its short name in an expression
     result2 = dataset.compute_variables(["income_times_2"])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6), "Error in accessing a_test_variable")
     # check that the cache uses the variable name with whitespace removed
     oldsize = len(cache)
     expr_with_spaces = "opus_core . test_agent. income_times_2  "
     name2 = VariableName(expr_with_spaces)
     newsize = len(cache)
     self.assertEqual(oldsize, newsize, msg="caching error")
     self.assert_(expr_with_spaces not in cache, msg="caching error")
     self.assertEqual(expr_with_spaces, name2.get_expression(), msg="caching error")
     self.assertEqual(name2.get_short_name(), "income_times_2", msg="bad value for shortname")
예제 #4
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 def test_alias_fully_qualified_variable_same_name(self):
     expr = "a_test_variable = opus_core.tests.a_test_variable"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='tests',
                         table_data={
                             "a_dependent_variable": array([1, 5, 10]),
                             "id": array([1, 3, 4])
                         })
     dataset = Dataset(in_storage=storage,
                       in_table_name='tests',
                       id_name="id",
                       dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([10, 50, 100])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6),
                  "Error in test_alias_fully_qualified_variable")
     result2 = dataset.compute_variables(['a_test_variable'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6),
                  "Error in accessing a_test_variable")
     v = VariableName(expr)
     # check that no autogen class was generated
     self.assertEqual(v.get_autogen_class(),
                      None,
                      msg="bad value for autogen_class")
     # check that the alias is correct
     self.assertEqual(v.get_alias(),
                      'a_test_variable',
                      msg="bad value for alias")
예제 #5
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 def test_unary_functions_fully_qualified_name(self):
     # this tests expressions with unary functions applied to a fully qualified name
     expr = "sqrt(opus_core.tests.a_test_variable)"
     storage = StorageFactory().get_storage("dict_storage")
     storage.write_table(
         table_name="tests", table_data={"a_dependent_variable": array([1, 5, 10]), "id": array([1, 3, 4])}
     )
     dataset = Dataset(in_storage=storage, in_table_name="tests", id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([3.16227766, 7.0710678, 10])
     self.assertEqual(
         ma.allclose(result, should_be, rtol=1e-3), True, msg="error in test_unary_functions_fully_qualified_name"
     )
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     autogen = name.get_autogen_class()
     self.assert_(issubclass(autogen, Variable), msg="autogen'd class isn't a Variable")
     self.assertEqual(name.get_package_name(), None, msg="bad value for package")
     self.assertEqual(name.get_dataset_name(), "tests", msg="bad value for dataset")
     self.assertEqual(name.get_short_name(), autogen.__name__, msg="bad value for shortname")
     self.assertEqual(name.get_alias(), autogen.__name__, msg="bad value for alias")
     # make an instance of the class and check the dependencies (since the dependent variables
     # all have fully-qualifed names we don't need to associate a dataset with the variable
     # for this test)
     self.assertEqual(
         autogen().dependencies(), ["opus_core.tests.a_test_variable"], msg="dependencies are incorrect"
     )
예제 #6
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 def test_alias_attribute_same_name(self):
     # this tests an expression consisting of an alias for a primary attribute that is the same name as the primary attribute
     expr = "persons = persons"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='tests',
                         table_data={
                             "persons": array([1, 5, 10]),
                             "id": array([1, 3, 4])
                         })
     dataset = Dataset(in_storage=storage,
                       in_table_name='tests',
                       id_name="id",
                       dataset_name="tests")
     result = dataset.compute_variables([expr])
     self.assertEqual(ma.allclose(result, [1, 5, 10], rtol=1e-7),
                      True,
                      msg="error in test_alias_attribute")
     name = VariableName(expr)
     self.assertEqual(name.get_short_name(),
                      'persons',
                      msg="bad value for shortname")
     self.assertEqual(name.get_alias(),
                      'persons',
                      msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(),
                      None,
                      msg="bad value for autogen_class")
예제 #7
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 def test_constants(self):
     # test an expression involving two dataset names, one of which is *_constant
     expr = "test_agent.age<=opus_constant.young_age"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='test_agents',
                         table_data={
                             "age": array([30, 20, 60, 80]),
                             "id": array([1, 3, 4, 10])
                         })
     storage.write_table(table_name='opus_constants',
                         table_data={
                             "young_age": array([35]),
                             "opus_constant_id": array([1])
                         })
     dataset_pool = DatasetPool(storage=storage)
     # Test that the dataset name is correct for expr.  It should be test_agent -- opus_constant just holds constants,
     # and is ignored as far as finding the dataset name for the expression.
     name = VariableName(expr)
     autogen = name.get_autogen_class()
     self.assertEqual(name.get_package_name(), None)
     self.assertEqual(name.get_dataset_name(), 'test_agent')
     # make an instance of the class and check the dependencies (it shouldn't depend on urbansim_constant)
     self.assertEqual(autogen().dependencies(), ['test_agent.age'])
     dataset = Dataset(in_storage=storage,
                       in_table_name='test_agents',
                       id_name="id",
                       dataset_name="test_agent")
     result = dataset.compute_variables([expr], dataset_pool=dataset_pool)
     should_be = array([True, True, False, False])
     self.assertEqual(ma.allequal(result, should_be), True)
예제 #8
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 def test_fully_qualified_DDD_SSS_variable(self):
     # this should use the test variable a_test_SSS_variable_DDD_SSS
     expr = "opus_core.tests.a_test_squid_variable_42_clam"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='tests',
         table_data={
             "a_dependent_variable":array([1,5,10]),
             "id":array([1,3,4])
             }
         )
     dataset = Dataset(in_storage=storage, in_table_name='tests', id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([10,50,100])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6), "Error in test_fully_qualified_DDD_SSS_variable")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(), 'opus_core', msg="bad value for package")
     self.assertEqual(name.get_dataset_name(), 'tests', msg="bad value for dataset")
     self.assertEqual(name.get_short_name(), 'a_test_squid_variable_42_clam', msg="bad value for shortname")
     self.assertEqual(name.get_alias(), 'a_test_squid_variable_42_clam', msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(), None, msg="bad value for autogen_class")
     # test that the variable can now also be accessed using its short name in an expression
     result2 = dataset.compute_variables(['a_test_squid_variable_42_clam'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6), "Error in accessing a_test_squid_variable_42_clam")
예제 #9
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 def test_unary_functions_fully_qualified_name(self):
     # this tests expressions with unary functions applied to a fully qualified name
     expr = "sqrt(opus_core.tests.a_test_variable)"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='tests',
         table_data={
             "a_dependent_variable":array([1,5,10]),
             "id":array([1,3,4])
             }
         )
     dataset = Dataset(in_storage=storage, in_table_name='tests', id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([3.16227766, 7.0710678, 10])
     self.assertEqual(ma.allclose(result, should_be, rtol=1e-3), True, msg="error in test_unary_functions_fully_qualified_name")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     autogen = name.get_autogen_class()
     self.assert_(issubclass(autogen, Variable), msg="autogen'd class isn't a Variable")
     self.assertEqual(name.get_package_name(), None, msg="bad value for package")
     self.assertEqual(name.get_dataset_name(), 'tests', msg="bad value for dataset")
     self.assertEqual(name.get_short_name(), autogen.__name__, msg="bad value for shortname")
     self.assertEqual(name.get_alias(), autogen.__name__, msg="bad value for alias")
     # make an instance of the class and check the dependencies (since the dependent variables
     # all have fully-qualifed names we don't need to associate a dataset with the variable
     # for this test)
     self.assertEqual(autogen().dependencies(), ['opus_core.tests.a_test_variable'], 
                      msg="dependencies are incorrect")
예제 #10
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 def test_alias_attribute(self):
     # this tests an expression consisting of an alias for a primary attribute
     expr = "p = persons"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='tests',
                         table_data={
                             "persons": array([1, 5, 10]),
                             "id": array([1, 3, 4])
                         })
     dataset = Dataset(in_storage=storage,
                       in_table_name='tests',
                       id_name="id",
                       dataset_name="tests")
     result = dataset.compute_variables([expr])
     self.assertEqual(ma.allclose(result, [1, 5, 10], rtol=1e-7),
                      True,
                      msg="error in test_alias_attribute")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(),
                      None,
                      msg="bad value for package")
     self.assertEqual(name.get_dataset_name(),
                      None,
                      msg="bad value for dataset")
     self.assert_(name.get_short_name().startswith('autogen'),
                  msg="bad value for shortname")
     self.assertEqual(name.get_alias(), 'p', msg="bad value for alias")
     self.assertNotEqual(name.get_autogen_class(),
                         None,
                         msg="bad value for autogen_class")
예제 #11
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 def test_constants(self):
     # test an expression involving two dataset names, one of which is *_constant
     expr = "test_agent.age<=opus_constant.young_age"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='test_agents',
         table_data={
             "age":array([30,20,60,80]),
             "id":array([1,3,4,10])
             }
         )
     storage.write_table(
         table_name='opus_constants',
         table_data={
             "young_age":array([35]),
             "opus_constant_id":array([1])
             }
         )
     dataset_pool = DatasetPool(storage=storage)
     # Test that the dataset name is correct for expr.  It should be test_agent -- opus_constant just holds constants, 
     # and is ignored as far as finding the dataset name for the expression.
     name = VariableName(expr)
     autogen = name.get_autogen_class()
     self.assertEqual(name.get_package_name(), None)
     self.assertEqual(name.get_dataset_name(), 'test_agent')
     # make an instance of the class and check the dependencies (it shouldn't depend on urbansim_constant)
     self.assertEqual(autogen().dependencies(), ['test_agent.age'])
     dataset = Dataset(in_storage=storage, in_table_name='test_agents', id_name="id", dataset_name="test_agent")
     result = dataset.compute_variables([expr], dataset_pool=dataset_pool)
     should_be = array( [True,True,False,False] )
     self.assertEqual( ma.allequal( result, should_be), True)
예제 #12
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 def test_fully_qualified_variable(self):
     # this tests an expression consisting of a fully-qualified variable
     expr = "opus_core.test_agent.income_times_2"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='test_agents',
                         table_data={
                             "income": array([1, 5, 10]),
                             "id": array([1, 3, 4])
                         })
     dataset = Dataset(in_storage=storage,
                       in_table_name='test_agents',
                       id_name="id",
                       dataset_name="test_agent")
     result = dataset.compute_variables([expr])
     should_be = array([2, 10, 20])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6),
                  "Error in test_fully_qualified_variable")
     # check that expr is in the cache of known expressions
     # (normally we shouldn't be accessing this private field, but just this once ...)
     cache = VariableName._cache
     self.assert_(expr in cache, msg="did not find expr in cache")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(),
                      'opus_core',
                      msg="bad value for package")
     self.assertEqual(name.get_dataset_name(),
                      'test_agent',
                      msg="bad value for dataset")
     self.assertEqual(name.get_short_name(),
                      'income_times_2',
                      msg="bad value for shortname")
     self.assertEqual(name.get_alias(),
                      'income_times_2',
                      msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(),
                      None,
                      msg="bad value for autogen_class")
     # test that the variable can now also be accessed using its short name in an expression
     result2 = dataset.compute_variables(['income_times_2'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6),
                  "Error in accessing a_test_variable")
     # check that the cache uses the variable name with whitespace removed
     oldsize = len(cache)
     expr_with_spaces = "opus_core . test_agent. income_times_2  "
     name2 = VariableName(expr_with_spaces)
     newsize = len(cache)
     self.assertEqual(oldsize, newsize, msg="caching error")
     self.assert_(expr_with_spaces not in cache, msg="caching error")
     self.assertEqual(expr_with_spaces,
                      name2.get_expression(),
                      msg="caching error")
     self.assertEqual(name2.get_short_name(),
                      'income_times_2',
                      msg="bad value for shortname")
예제 #13
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 def test_dataset_qualified_attribute(self):
     expr = "tests.persons"
     storage = StorageFactory().get_storage("dict_storage")
     storage.write_table(table_name="tests", table_data={"persons": array([1, 5, 10]), "id": array([1, 3, 4])})
     dataset = Dataset(in_storage=storage, in_table_name="tests", id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     self.assertEqual(ma.allclose(result, [1, 5, 10], rtol=1e-7), True, msg="error in test_attribute")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(), None, msg="bad value for package")
     self.assertEqual(name.get_dataset_name(), "tests", msg="bad value for dataset")
     self.assertEqual(name.get_short_name(), "persons", msg="bad value for shortname")
     self.assertEqual(name.get_alias(), "persons", msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(), None, msg="bad value for autogen_class")
예제 #14
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 def test_alias_attribute_same_name(self):
     # this tests an expression consisting of an alias for a primary attribute that is the same name as the primary attribute
     expr = "persons = persons"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='tests',
         table_data={
             "persons":array([1,5,10]),
             "id":array([1,3,4])
             }
         )
     dataset = Dataset(in_storage=storage, in_table_name='tests', id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     self.assertEqual(ma.allclose(result, [1,5,10], rtol=1e-7), True, msg="error in test_alias_attribute")
     name = VariableName(expr)
     self.assertEqual(name.get_short_name(), 'persons', msg="bad value for shortname")
     self.assertEqual(name.get_alias(), 'persons', msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(), None, msg="bad value for autogen_class")
 def add_prefix_to_variable_names(self, variable_names, dataset, variable_package, resources):
     """Add a prefix of 'package.dataset_name.' to variable_names from resources.
     """
     if resources is None:
         return
     if not isinstance(variable_names, list):
         variable_names = [variable_names]
     for variable_name in variable_names:
         variable_string = resources.get(variable_name, None)
         if variable_string is not None:
             variable_string_name = VariableName(variable_string)
             if (variable_string_name.get_dataset_name() == None) and \
                         (variable_string_name.get_autogen_class() is None) :
                 add_string = ""
                 if variable_string_name.get_package_name() == None:
                     add_string = "%s." % variable_package
                 add_string = add_string + dataset.get_dataset_name() + "."
                 resources.merge({
                     variable_name:add_string+variable_string})
 def add_prefix_to_variable_names(self, variable_names, dataset,
                                  variable_package, resources):
     """Add a prefix of 'package.dataset_name.' to variable_names from resources.
     """
     if resources is None:
         return
     if not isinstance(variable_names, list):
         variable_names = [variable_names]
     for variable_name in variable_names:
         variable_string = resources.get(variable_name, None)
         if variable_string is not None:
             variable_string_name = VariableName(variable_string)
             if (variable_string_name.get_dataset_name() == None) and \
                         (variable_string_name.get_autogen_class() is None) :
                 add_string = ""
                 if variable_string_name.get_package_name() == None:
                     add_string = "%s." % variable_package
                 add_string = add_string + dataset.get_dataset_name() + "."
                 resources.merge(
                     {variable_name: add_string + variable_string})
예제 #17
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 def test_alias_attribute(self):
     # this tests an expression consisting of an alias for a primary attribute
     expr = "p = persons"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='tests',
         table_data={
             "persons":array([1,5,10]),
             "id":array([1,3,4])
             }
         )
     dataset = Dataset(in_storage=storage, in_table_name='tests', id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     self.assertEqual(ma.allclose(result, [1,5,10], rtol=1e-7), True, msg="error in test_alias_attribute")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(), None, msg="bad value for package")
     self.assertEqual(name.get_dataset_name(), None, msg="bad value for dataset")
     self.assert_(name.get_short_name().startswith('autogen'), msg="bad value for shortname")
     self.assertEqual(name.get_alias(), 'p', msg="bad value for alias")
     self.assertNotEqual(name.get_autogen_class(), None, msg="bad value for autogen_class")
예제 #18
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 def test_alias_fully_qualified_variable_same_name(self):
     expr = "a_test_variable = opus_core.tests.a_test_variable"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='tests',
         table_data={
             "a_dependent_variable":array([1,5,10]),
             "id":array([1,3,4])
             }
         )
     dataset = Dataset(in_storage=storage, in_table_name='tests', id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([10,50,100])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6), "Error in test_alias_fully_qualified_variable")
     result2 = dataset.compute_variables(['a_test_variable'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6), "Error in accessing a_test_variable")
     v = VariableName(expr)
     # check that no autogen class was generated
     self.assertEqual(v.get_autogen_class(), None, msg="bad value for autogen_class")        
     # check that the alias is correct
     self.assertEqual(v.get_alias(), 'a_test_variable', msg="bad value for alias")
예제 #19
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 def test_fully_qualified_DDD_SSS_variable(self):
     # this should use the test variable a_test_SSS_variable_DDD_SSS
     expr = "opus_core.tests.a_test_squid_variable_42_clam"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(table_name='tests',
                         table_data={
                             "a_dependent_variable": array([1, 5, 10]),
                             "id": array([1, 3, 4])
                         })
     dataset = Dataset(in_storage=storage,
                       in_table_name='tests',
                       id_name="id",
                       dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([10, 50, 100])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6),
                  "Error in test_fully_qualified_DDD_SSS_variable")
     # check that the access methods for the variable all return the correct values
     name = VariableName(expr)
     self.assertEqual(name.get_package_name(),
                      'opus_core',
                      msg="bad value for package")
     self.assertEqual(name.get_dataset_name(),
                      'tests',
                      msg="bad value for dataset")
     self.assertEqual(name.get_short_name(),
                      'a_test_squid_variable_42_clam',
                      msg="bad value for shortname")
     self.assertEqual(name.get_alias(),
                      'a_test_squid_variable_42_clam',
                      msg="bad value for alias")
     self.assertEqual(name.get_autogen_class(),
                      None,
                      msg="bad value for autogen_class")
     # test that the variable can now also be accessed using its short name in an expression
     result2 = dataset.compute_variables(['a_test_squid_variable_42_clam'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6),
                  "Error in accessing a_test_squid_variable_42_clam")
예제 #20
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 def test_alias_fully_qualified_variable(self):
     expr = "x = opus_core.tests.a_test_variable"
     storage = StorageFactory().get_storage('dict_storage')
     storage.write_table(
         table_name='tests',
         table_data={
             "a_dependent_variable":array([1,5,10]),
             "id":array([1,3,4])
             }
         )
     dataset = Dataset(in_storage=storage, in_table_name='tests', id_name="id", dataset_name="tests")
     result = dataset.compute_variables([expr])
     should_be = array([10,50,100])
     self.assert_(ma.allclose(result, should_be, rtol=1e-6), "Error in test_alias_fully_qualified_variable")
     # check that the new var has x as an alias
     v = VariableName(expr)
     self.assertEqual(v.get_package_name(), None, msg="bad value for package_name")
     self.assertEqual(v.get_dataset_name(), 'tests', msg="bad value for dataset_name")
     self.assert_(v.get_short_name().startswith('autogen'), msg="bad value for shortname")
     self.assertEqual(v.get_alias(), 'x', msg="bad value for alias")
     self.assertNotEqual(v.get_autogen_class(), None, msg="bad value for autogen_class")
     # check that the alias has the correct value
     result2 = dataset.compute_variables(['x'])
     self.assert_(ma.allclose(result2, should_be, rtol=1e-6), "Error in accessing a_test_variable")