def test_FL_file(self, caplog, tmpdir):
caplog.set_level(logging.INFO)
path_str = str(tmpdir).replace('\\', '/')
log_path = '{}/log.txt'.format(path_str)
close_loggers = outputting.fancy_logger(log_file=log_path)
captured = caplog.records
standard_captured = [k.message for k in captured]
date = outputting.date()
correct = ['{}'.format(date),
'Log initialised',
'The log you are reading was written to {}'.format(log_path)]
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line
with open(log_path) as log:
cleaned_log = [l[37:].strip() for l in log.readlines()]
for correct_line, standard_captured_line in itertools.zip_longest(correct, cleaned_log):
assert standard_captured_line == correct_line
close_loggers()
def test_S_config(self, caplog):
caplog.set_level(logging.INFO)
config = {'label': None,
'config_file': None,
'output_path': None,
'pickle': False,
'min_log_level': 'INFO',
'numpy_error_level': 'log'}
with outputting.Saving(config=config) as saving:
assert saving is None
captured = caplog.records
for level in [k.levelname for k in captured]:
assert level == 'INFO'
captured_loggers = [k.name for k in captured]
correct_loggers = ['Setup', 'Setup', 'Framework', 'Setup']
for capt, corr in itertools.zip_longest(captured_loggers, correct_loggers):
assert capt == corr
standard_captured = [k.message for k in captured]
correct = ['{}'.format(outputting.date()),
'Log initialised',
'Beginning task labelled: Untitled',
'Shutting down program']
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line
def test_S_folder(self, output_folder, caplog):
caplog.set_level(logging.INFO)
output_path = str(output_folder).replace('\\', '/')
simulation.run(output_path=output_path)
captured = caplog.records
for level in [k.levelname for k in captured]:
assert level == 'INFO'
captured_loggers = [k.name for k in captured]
correct_loggers = ['Setup', 'Setup', 'Framework', 'Simulation', 'Setup']
for capt, corr in itertools.zip_longest(captured_loggers, correct_loggers):
assert capt == corr
standard_captured = [k.message.replace('\n', '') for k in captured]
correct = ['{}'.format(outputting.date()),
'Log initialised',
'Beginning task labelled: Untitled',
"Simulation 0 contains the task Basic: Trials = 100.The model used is QLearn: number_actions = 2, number_cues = 1, number_critics = 2, prior = array([0.5, 0.5]), non_action = 'None', actionCode = {0: 0, 1: 1}, stimulus_shaper = 'model.modelTemplate.Stimulus with ', reward_shaper = 'model.modelTemplate.Rewards with ', decision_function = 'discrete.weightProb with task_responses : 0, 1', alpha = 0.3, beta = 4, expectation = array([[0.5], [0.5]]).",
'Shutting down program']
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line
assert os.listdir(output_path) == []
def test_S_label(self, caplog, tmpdir):
caplog.set_level(logging.INFO)
label = 'label'
current_date = outputting.date()
path_str = str(tmpdir)
path_clean = path_str.replace('\\', '/')
log_path = '{}/Outputs/{}_{}/log.txt'.format(path_clean, label, current_date)
config = {'label': label,
'config_file': None,
'output_path': path_str,
'pickle': False,
'min_log_level': 'INFO',
'numpy_error_level': 'log'}
with outputting.Saving(config=config) as saving:
assert callable(saving)
captured = caplog.records
for level in [k.levelname for k in captured]:
assert level == 'INFO'
captured_loggers = [k.name for k in captured]
correct_loggers = ['Setup', 'Setup', 'Setup', 'Framework', 'Setup']
for capt, corr in itertools.zip_longest(captured_loggers, correct_loggers):
assert capt == corr
standard_captured = [k.message for k in captured]
correct = ['{}'.format(current_date),
'Log initialised',
'The log you are reading was written to {}'.format(log_path),
'Beginning task labelled: {}'.format(label),
'Shutting down program']
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line
with open(log_path) as log:
cleaned_log = [l[37:].strip() for l in log.readlines()]
for correct_line, standard_captured_line in itertools.zip_longest(correct, cleaned_log):
assert standard_captured_line == correct_line
def test_S_label(self, output_folder, caplog):
caplog.set_level(logging.INFO)
output_path = str(output_folder).replace('\\', '/')
date = outputting.date()
simulation.run(label='test', output_path=output_path)
captured = caplog.records
for level in [k.levelname for k in captured]:
assert level == 'INFO'
captured_loggers = [k.name for k in captured]
correct_loggers = ['Setup', 'Setup', 'Setup', 'Framework', 'Simulation', 'Setup']
for capt, corr in itertools.zip_longest(captured_loggers, correct_loggers):
assert capt == corr
standard_captured = [k.message.replace('\n', '') for k in captured]
correct = ['{}'.format(date),
'Log initialised',
'The log you are reading was written to {}/Outputs/test_{}/log.txt'.format(output_path, date),
'Beginning task labelled: test',
"Simulation 0 contains the task Basic: Trials = 100.The model used is QLearn: number_actions = 2, number_cues = 1, number_critics = 2, prior = array([0.5, 0.5]), non_action = 'None', actionCode = {0: 0, 1: 1}, stimulus_shaper = 'model.modelTemplate.Stimulus with ', reward_shaper = 'model.modelTemplate.Rewards with ', decision_function = 'discrete.weightProb with task_responses : 0, 1', alpha = 0.3, beta = 4, expectation = array([[0.5], [0.5]]).",
'Shutting down program']
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line
assert os.path.exists(output_path)
assert os.path.exists(output_path + '/Outputs')
folder_path = output_path + '/Outputs/test_{}/'.format(date)
assert os.path.exists(folder_path)
assert os.path.exists(folder_path + 'data')
assert not os.path.exists(folder_path + 'Pickle')
with open(folder_path + 'log.txt') as log:
cleaned_log = [l.split(' ')[-1].strip() for l in log.readlines()]
correct[-2] = correct[-2][:-15]
final_correct = correct[-1]
correct[-1] = '[0.5]]).'
correct.append(final_correct)
for correct_line, standard_captured_line in itertools.zip_longest(correct, cleaned_log):
assert standard_captured_line == correct_line
def test_FL_none(self, caplog):
caplog.set_level(logging.INFO)
close_loggers = outputting.fancy_logger()
captured = caplog.records
standard_captured = [k.message for k in captured]
for level in [k.levelname for k in captured]:
assert level == 'INFO'
for logger in [k.name for k in captured]:
assert logger == 'Setup'
correct = ['{}'.format(outputting.date()),
'Log initialised']
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line
close_loggers()
def test_S_none(self, caplog):
caplog.set_level(logging.INFO)
with outputting.Saving() as saving:
captured = caplog.records.copy()
assert saving is None
for level in [k.levelname for k in captured]:
assert level == 'INFO'
captured_loggers = [k.name for k in captured]
correct_loggers = ['Setup', 'Setup', 'Framework']
for capt, corr in itertools.zip_longest(captured_loggers, correct_loggers):
assert capt == corr
standard_captured = [k.message for k in captured]
correct = ['{}'.format(outputting.date()),
'Log initialised',
'Beginning task labelled: Untitled']
for correct_line, standard_captured_line in itertools.zip_longest(correct, standard_captured):
assert standard_captured_line == correct_line