def test_selfing_after_outcrossing(self):
"""Test scinario: generations of selfing after generations of outcrossing."""
# outcrossing
self.sim.evolve(initOps=self.initOps,
matingScheme=simu.RandomMating(
subPopSize=10,
sexMode=self.sexMode,
ops=[
simu.MendelianGenoTransmitter(),
cf.MyOutcrossingTagger()
]),
gen=10)
for pop in self.sim.populations():
for ind in pop.individuals():
assert ind.info('self_gen') == 0
assert pop.dvars().gen == 10
# selfing
self.sim.evolve(
initOps=self.initOps,
matingScheme=simu.SelfMating(
subPopSize=10,
sexMode=self.sexMode,
ops=[simu.SelfingGenoTransmitter(),
cf.MySelfingTagger()]),
gen=10)
for pop in self.sim.populations():
for ind in pop.individuals():
assert ind.info('self_gen') == 10
assert pop.dvars().gen == 20
def test_pure_selfing(self):
"""Test pure inbreeding population.
When all individuals undergo selfing, the values in `self_gen` should be identical
to the number of generations since simulations started.
"""
self.sim.evolve(
initOps=self.initOps,
matingScheme=simu.SelfMating(
subPopSize=10,
sexMode=self.sexMode,
ops=[simu.SelfingGenoTransmitter(),
cf.MySelfingTagger()]),
gen=10)
for pop in self.sim.populations():
for ind in pop.individuals():
assert ind.info('self_gen') == 10