def test_sanity(self): cluster_renders = C.load_installed_cluster_templates() log.debug(pprint.pformat(cluster_renders)) self.assertIsNotNone(cluster_renders)
import unittest import logging # this will load all the tasks modules import pbsmrtpipe.loader RTASKS = pbsmrtpipe.loader.load_all_tool_contracts() import pbsmrtpipe.graph.bgraph as B import pbsmrtpipe.cluster as C import pbsmrtpipe.pb_io as IO INSTALLED_CLUSTER_TEMPLATES = C.load_installed_cluster_templates() log = logging.getLogger(__name__) DEEP_DEBUG = True def _to_workflow_options_settings(path): preset_record = IO.parse_pipeline_preset_xml(path) d = dict(preset_record.workflow_options) wopts = IO.WorkflowLevelOptions.from_id_dict(d) return wopts class TestBindingFormat(unittest.TestCase): bs = ['pbsmrtpipe.tasks.dev_hello:1', 'pbsmrtpipe.tasks.dev_hello2:9:1']
import unittest import logging # this will load all the tasks modules import pbsmrtpipe.loader RTASKS = pbsmrtpipe.loader.load_all_tool_contracts() import pbsmrtpipe.graph.bgraph as B import pbsmrtpipe.cluster as C import pbsmrtpipe.pb_io as IO INSTALLED_CLUSTER_TEMPLATES = C.load_installed_cluster_templates() log = logging.getLogger(__name__) DEEP_DEBUG = True def _to_workflow_options_settings(path): preset_record = IO.parse_pipeline_preset_xml(path) d = dict(preset_record.workflow_options) wopts = IO.WorkflowLevelOptions.from_id_dict(d) return wopts class TestBindingFormat(unittest.TestCase): bs = ['pbsmrtpipe.tasks.dev_hello:1', 'pbsmrtpipe.tasks.dev_hello2:9:1']