def __init__(self, data_folder='Data', models_folder='Models', working_folder='Working_Folder'):
"""
Constructor.
:param data_folder: the folder containing the data
:param models_folder: the folder containing the models
:param working_folder: the folder to store the results
"""
Pipeline.__init__(self, data_folder, models_folder, working_folder)
def __init__(
self,
data_folder="Data",
models_folder="Models",
working_folder="Working_Folder",
sim_data_folder="param_estim_data",
sim_plots_folder="param_estim_plots",
):
__doc__ = Pipeline.__init__.__doc__
Pipeline.__init__(self, data_folder, models_folder, working_folder, sim_data_folder, sim_plots_folder)
# The folder containing the updated Copasi models
self.__updated_models_folder = "updated_models"
def __init__(self, user_id, path_to_dataset, random_state=42): Pipeline.__init__(self, user_id, path_to_dataset, random_state) self.log = Log() msg = self.__class__.__name__+'.'+utils.get_function_caller()+' -> enter' self.log.print(msg) self.user_id = user_id msg = 'user_id: ',self.user_id self.log.print(msg) self.path_to_dataset = path_to_dataset msg = 'path_to_dataset: ',self.path_to_dataset self.log.print(msg) self.random_state = random_state msg = 'random_state: ',self.random_state self.log.print(msg) self.dataframe = pd.read_csv(self.path_to_dataset) self.prediction = None
def __init__(self, data_folder='Data', models_folder='Models', working_folder='Working_Folder',
sim_data_folder='double_param_scan_data', sim_plots_folder='double_param_scan_plots'):
__doc__ = Pipeline.__init__.__doc__
Pipeline.__init__(self, data_folder, models_folder, working_folder, sim_data_folder, sim_plots_folder)
def __init__(self, data_folder='Data', models_folder='Models', working_folder='Working_Folder',
sim_data_folder='sensitivity_data', sim_plots_folder='sensitivity_plots'):
__doc__ = Pipeline.__init__.__doc__
Pipeline.__init__(self, data_folder, models_folder, working_folder, sim_data_folder, sim_plots_folder)
self.__sensitivities_dir="sensitivities"
def __init__(self):
Pipeline.__init__(self)
def __init__(self, options):
Pipeline.__init__(self, options)
def __init__(self, path_to_dataset, model):
Pipeline.__init__(self, path_to_dataset, model)
self.X = self.dataframe
def __init__(self):
Pipeline.__init__(self)
self.sqlFlag = False
def __init__(self, wheel=None, proxy=None, start=True):
Pipeline.__init__(self, wheel, proxy, start)
def __init__(self, data_folder='Data', models_folder='Models', working_folder='Working_Folder',
sim_data_folder='simulate_data', sim_plots_folder='simulate_plots'):
__doc__ = Pipeline.__init__.__doc__
Pipeline.__init__(self, data_folder, models_folder, working_folder, sim_data_folder, sim_plots_folder)
