def main():
"""
NAME
pmag_results_extract.py
DESCRIPTION
make a tab delimited output file from pmag_results table
SYNTAX
pmag_results_extract.py [command line options]
OPTIONS
-h prints help message and quits
-f RFILE, specify pmag_results table; default is pmag_results.txt
-fa AFILE, specify er_ages table; default is NONE
-fsp SFILE, specify pmag_specimens table, default is NONE
-fcr CFILE, specify pmag_criteria table, default is NONE
-g include specimen_grade in table - only works for PmagPy generated pmag_specimen formatted files.
-tex, output in LaTeX format
"""
do_help = pmag.get_flag_arg_from_sys('-h')
if do_help:
print(main.__doc__)
return False
res_file = pmag.get_named_arg_from_sys('-f', 'pmag_results.txt')
crit_file = pmag.get_named_arg_from_sys('-fcr', '')
spec_file = pmag.get_named_arg_from_sys('-fsp', '')
age_file = pmag.get_named_arg_from_sys('-fa', '')
grade = pmag.get_flag_arg_from_sys('-g')
latex = pmag.get_flag_arg_from_sys('-tex')
WD = pmag.get_named_arg_from_sys('-WD', os.getcwd())
ipmag.pmag_results_extract(res_file, crit_file, spec_file, age_file, latex, grade, WD)
def main():
"""
NAME
pmag_results_extract.py
DESCRIPTION
make a tab delimited output file from pmag_results table
SYNTAX
pmag_results_extract.py [command line options]
OPTIONS
-h prints help message and quits
-f RFILE, specify pmag_results table; default is pmag_results.txt
-fa AFILE, specify er_ages table; default is NONE
-fsp SFILE, specify pmag_specimens table, default is NONE
-fcr CFILE, specify pmag_criteria table, default is NONE
-g include specimen_grade in table - only works for PmagPy generated pmag_specimen formatted files.
-tex, output in LaTeX format
"""
do_help = pmag.get_flag_arg_from_sys('-h')
if do_help:
print(main.__doc__)
return False
res_file = pmag.get_named_arg('-f', 'pmag_results.txt')
crit_file = pmag.get_named_arg('-fcr', '')
spec_file = pmag.get_named_arg('-fsp', '')
age_file = pmag.get_named_arg('-fa', '')
grade = pmag.get_flag_arg_from_sys('-g')
latex = pmag.get_flag_arg_from_sys('-tex')
WD = pmag.get_named_arg('-WD', os.getcwd())
ipmag.pmag_results_extract(res_file, crit_file, spec_file, age_file, latex, grade, WD)
def test_extract_latex(self):
direction_file = os.path.join(self.result_WD, 'Directions.tex')
intensity_file = os.path.join(self.result_WD, 'Intensities.tex')
site_file = os.path.join(self.result_WD, 'SiteNfo.tex')
specimen_file = os.path.join(self.result_WD, 'Specimens.tex')
crit_file = os.path.join(self.result_WD, 'Criteria.tex')
files = [direction_file, intensity_file, site_file, specimen_file,
crit_file]
for f in files:
self.assertFalse(os.path.exists(f))
res, outfiles = ipmag.pmag_results_extract(latex=True)
self.assertTrue(res)
files = [os.path.join(self.result_WD, f) for f in outfiles]
for f in files:
self.assertTrue(os.path.exists(f))
def test_extract_latex(self):
direction_file = os.path.join(self.result_WD, 'Directions.tex')
intensity_file = os.path.join(self.result_WD, 'Intensities.tex')
site_file = os.path.join(self.result_WD, 'SiteNfo.tex')
specimen_file = os.path.join(self.result_WD, 'Specimens.tex')
crit_file = os.path.join(self.result_WD, 'Criteria.tex')
files = [direction_file, intensity_file, site_file, specimen_file,
crit_file]
for f in files:
self.assertFalse(os.path.exists(f))
res, outfiles = ipmag.pmag_results_extract(latex=True)
self.assertTrue(res)
files = [os.path.join(self.result_WD, f) for f in outfiles]
for f in files:
self.assertTrue(os.path.exists(f))
