def test_procedureGET(self):
self.add_procedure()
self.login()
rv = self.client.get('/api/patient/%s/procedure' % TEST_USER_ID)
data = json.loads(rv.data)
self.assertEquals(
'367336001',
data['entry'][0]['resource']['code']['coding'][0]['code'])
self.assertEquals(
'Chemotherapy',
data['entry'][0]['resource']['code']['coding'][0]['display'])
self.assertEquals(
Reference.patient(TEST_USER_ID).as_fhir()['reference'],
data['entry'][0]['resource']['meta']['by']['reference'])
last_updated = FHIR_datetime.parse(
data['entry'][0]['resource']['meta']['lastUpdated'])
self.assertAlmostEquals(datetime.utcnow(),
last_updated,
delta=timedelta(seconds=5))
start_time = FHIR_datetime.parse(
data['entry'][0]['resource']['performedPeriod']['start'])
self.assertAlmostEquals(datetime.utcnow(),
start_time,
delta=timedelta(seconds=5))
self.assertEquals(current_app.config.metadata.version,
data['entry'][0]['resource']['meta']['version'])
def test_microsecond_truncation():
"""Microseconds should be rounded in FHIR output"""
sample = datetime.utcnow()
sample = sample.replace(tzinfo=pytz.utc)
if sample.microsecond == 0:
sample = sample.replace(microsecond=1234567890)
assert sample.isoformat() != FHIR_datetime.as_fhir(sample)
expected = sample.replace(microsecond=0)
assert expected.isoformat() == FHIR_datetime.as_fhir(sample)
def test_tz_aware_output():
"""FHIR_datetime.as_fhir() should always be tz aware (UTC)"""
unaware = datetime(2016, 7, 15, 9, 20, 37, 0)
# generate fhir - expect UTC tz info at end
isostring = FHIR_datetime.as_fhir(unaware)
assert isostring[-6:] == '+00:00'
def test_tz_aware_conversion():
eastern = pytz.timezone('US/Eastern')
aware = datetime(2016, 7, 15, 9, 20, 37, 0, eastern)
parsed = FHIR_datetime.parse(aware.strftime("%Y-%m-%dT%H:%M:%S%z"))
# FHIR_datetime converts to UTC and strips the tzinfo
# for safe comparisons with other tz unaware strings
assert parsed.tzinfo is None
# Add it back in to confirm values match
parsed = parsed.replace(tzinfo=pytz.utc)
assert aware == parsed
def test_procedureGET(self):
self.add_procedure()
self.login()
response = self.client.get('/api/patient/%s/procedure' % TEST_USER_ID)
data = response.json
assert ('367336001'
== data['entry'][0]['resource']['code']['coding'][0]['code'])
assert ('Chemotherapy' ==
data['entry'][0]['resource']['code']['coding'][0]['display'])
assert (Reference.patient(TEST_USER_ID).as_fhir()['reference']
== data['entry'][0]['resource']['meta']['by']['reference'])
last_updated = FHIR_datetime.parse(
data['entry'][0]['resource']['meta']['lastUpdated'])
self.assertAlmostEqual(
datetime.utcnow(), last_updated, delta=timedelta(seconds=5))
start_time = FHIR_datetime.parse(
data['entry'][0]['resource']['performedPeriod']['start'])
self.assertAlmostEqual(
datetime.utcnow(), start_time, delta=timedelta(seconds=5))
assert (current_app.config.metadata['version']
== data['entry'][0]['resource']['meta']['version'])
def test_tz_unaware_conversion(self):
unaware = datetime(2016, 7, 15, 9, 20, 37, 0)
parsed = FHIR_datetime.parse(unaware.strftime("%Y-%m-%dT%H:%M:%S"))
self.assertEquals(unaware, parsed)
def test_tz_aware_conversion(self):
eastern = pytz.timezone('US/Eastern')
aware = datetime(2016, 7, 15, 9, 20, 37, 0, eastern)
parsed = FHIR_datetime.parse(aware.strftime("%Y-%m-%dT%H:%M:%S%z"))
self.assertEquals(aware, parsed)
self.assertEquals(pytz.utc, parsed.tzinfo)
def test_tz_unaware_conversion():
unaware = datetime(2016, 7, 15, 9, 20, 37, 0)
parsed = FHIR_datetime.parse(unaware.strftime("%Y-%m-%dT%H:%M:%S"))
assert unaware == parsed