def matlab_code_for_rcm_ordered_corr_coef_for_adjacency_matrix(data, definition, def_args):
f = open(OUT_DIR.RCM_MATRIC + 'code1.m', 'w')
countries_list = data.top_countries_by_export_all_year(50)
for year in data.all_years:
adj_matrix = adjacency_matrix(data, definition, def_args, year, countries_list)
for line in adjacency_rcm_ordered(corrcoef(adj_matrix), 0, [countries_list, countries_list], '%s' % year, True):
f.write("%s\n" % line)
f.close()
def write_all_correlation_files(data, definition, def_args):
window_size = 4
for year in data.all_years:
write_correlation_list('adj-y%d.txt' % year, adjacency_matrix(data, definition, def_args, year), 0)
if 1963 + window_size <= year:
write_correlation_list('pn-y%d-to-y%d.txt' % (year - window_size + 1, year),
positives_and_negatives_matrix(data, definition, def_args,
range(year - window_size + 1, year + 1)), 0.5)
def write_matlab_code_for_rcm(data, definition, def_args, countries=DEFAULT_COUNTRIES_LIST):
f = open(OUT_DIR.RCM_MATRIC + 'code.m', 'w')
for year in [1965, 1970, 1975, 1980, 1985, 1990, 1995, 1999, 2000]:
for coeff in range(0, 11):
c = coeff * .05
adj_matrix = adjacency_matrix(data, definition, def_args, year, countries)
for line in adjacency_rcm_ordered(corrcoef(adj_matrix), c, [countries, countries]):
f.write(line + "\n")
f.close()
def matlab_code_for_rcm_ordered_corr_coef_for_adjacency_matrix(data, definition, def_args):
f = open(OUT_DIR.RCM_MATRIC + 'iraniraqadj.m', 'w')
all_countries = DEFAULT_COUNTRIES_LIST
allowed_countries = iran_iraq_countries
for year in data.all_years:
data_matrix = adjacency_matrix(data, definition, def_args, year, all_countries)
for line in adjacency_rcm_ordered(data_matrix, 0, [all_countries, allowed_countries], '%s' % year):
f.write("%s\n" % line)
f.close()
def write_matlab_code_for_corrmatrix(data, years, definition, def_args, file_prefix,
countries=DEFAULT_COUNTRIES_LIST,
country_study=False):
for year in years:
corrcoef_mat = corrcoef(adjacency_matrix(data, definition, def_args, year, countries))
print matrix_py_matlab_with_name('corrmatrix%d' % year, corrcoef_mat, country_study)
print "corrmatrix=[%s]" % (';'.join(['corrmatrix%d' % year for year in years]))
print list_as_matlab_vector('countriesVectorColumn', countries)
if country_study:
print "countriesVectorRow={%s};" % (str(concat_countries([countries[0]], years))[1:-1])
else:
print "countriesVectorRow={%s};" % (str(concat_countries(countries, years))[1:-1])
print "x=redgreencmap(200);"
print "HeatMap(corrmatrix,'RowLabels',countriesVectorRow,'ColumnLabels',countriesVectorColumn, 'Colormap', horzcat(horzcat(x(:,2),x(:,1)),x(:,3)));"
print "saveas(gcf,'%s','png');" % (file_prefix)