def test_retrieve_wrong_url_xml():
with pytest.raises(ValueError):
r = ena.retrieve('display=111BAC6&7592=some', fmt='xml')
def test_retrieve_fasta():
r = ena.retrieve('BAC67592', fmt='fasta')
assert r.startswith('>ENA|BAC67592')
def test_retrieve_many_ids():
with pytest.raises(ValueError):
r = ena.retrieve('BAC67592 BAC67593 BAC67580')
def test_retrieve_invalid_id():
with pytest.raises(ValueError):
r = ena.retrieve('111BAC67592')
def test_retrieve_embl():
r = ena.retrieve('BAC67592', fmt='text')
assert r.startswith('ID BAC67592;')
def test_retrieve_fasta_wrong_id():
with pytest.raises(NoDataError):
r = ena.retrieve('BAC00000', fmt='fasta')
def test_retrieve_xml():
r = ena.retrieve('BAC67592', fmt='xml')
assert r.startswith('<?xml version="1.0" encoding="UTF-8"?>')