def test_flux_balance_rxn_2(self):
fluxes = dict(
fluxanalysis.flux_balance(self.model,
'rxn_2',
tfba=False,
solver=self.solver))
self.assertAlmostEqual(fluxes['rxn_2'], 0)
def test_flux_balance_rxn_3(self):
fluxes = dict(fluxanalysis.flux_balance(
self.model, 'rxn_3', tfba=False, solver=self.solver))
self.assertAlmostEqual(fluxes['rxn_1'], 500)
self.assertAlmostEqual(fluxes['rxn_2'], 0)
self.assertAlmostEqual(fluxes['rxn_3'], 1000)
self.assertAlmostEqual(fluxes['rxn_6'], 1000)
def test_flux_balance_tfba_exchange_d(self):
fluxes = dict(fluxanalysis.flux_balance(
self.model, 'ex_D', tfba=True, solver=self.solver))
self.assertAlmostEqual(fluxes['ex_A'], -10)
self.assertAlmostEqual(fluxes['ex_D'], 10)
self.assertAlmostEqual(fluxes['rxn_2'], 10)
self.assertAlmostEqual(fluxes['rxn_4'], 0)
self.assertAlmostEqual(fluxes['rxn_5'], 0)
def test_flux_balance_tfba_exchange_d(self):
fluxes = dict(
fluxanalysis.flux_balance(self.model,
'ex_D',
tfba=True,
solver=self.solver))
self.assertAlmostEqual(fluxes['ex_A'], -10)
self.assertAlmostEqual(fluxes['ex_D'], 10)
self.assertAlmostEqual(fluxes['rxn_2'], 10)
self.assertAlmostEqual(fluxes['rxn_4'], 0)
self.assertAlmostEqual(fluxes['rxn_5'], 0)
def test_flux_balance_rxn_2(self):
fluxes = dict(fluxanalysis.flux_balance(
self.model, 'rxn_2', tfba=False, solver=self.solver))
self.assertEqual(fluxes['rxn_2'], 0)