def image(self, filename):
"""Filename, including relative or absolute path. The image
can be any format that the Python Imaging Library can import
(almost any). Can also be an image already loaded by PIL.
"""
filename = pathToString(filename)
self.__dict__['image'] = filename
if isinstance(filename, basestring):
# is a string - see if it points to a file
if os.path.isfile(filename):
self.filename = filename
im = Image.open(self.filename)
im = im.transpose(Image.FLIP_TOP_BOTTOM)
else:
logging.error("couldn't find image...%s" % filename)
core.quit()
else:
# not a string - have we been passed an image?
try:
im = filename.copy().transpose(Image.FLIP_TOP_BOTTOM)
except AttributeError: # apparently not an image
logging.error("couldn't find image...%s" % filename)
core.quit()
self.filename = repr(filename) # '<Image.Image image ...>'
self.size = im.size
# set correct formats for bytes/floats
if im.mode == 'RGBA':
self.imArray = numpy.array(im).astype(numpy.ubyte)
self.internalFormat = GL.GL_RGBA
else:
self.imArray = numpy.array(im.convert("RGB")).astype(numpy.ubyte)
self.internalFormat = GL.GL_RGB
self.dataType = GL.GL_UNSIGNED_BYTE
self._needStrUpdate = True
def image(self, filename):
"""Filename, including relative or absolute path. The image
can be any format that the Python Imaging Library can import
(almost any). Can also be an image already loaded by PIL.
"""
filename = pathToString(filename)
self.__dict__['image'] = filename
if isinstance(filename, basestring):
# is a string - see if it points to a file
if os.path.isfile(filename):
self.filename = filename
im = Image.open(self.filename)
im = im.transpose(Image.FLIP_TOP_BOTTOM)
else:
logging.error("couldn't find image...%s" % filename)
core.quit()
else:
# not a string - have we been passed an image?
try:
im = filename.copy().transpose(Image.FLIP_TOP_BOTTOM)
except AttributeError: # apparently not an image
logging.error("couldn't find image...%s" % filename)
core.quit()
self.filename = repr(filename) # '<Image.Image image ...>'
self.size = im.size
# set correct formats for bytes/floats
if im.mode == 'RGBA':
self.imArray = numpy.array(im).astype(numpy.ubyte)
self.internalFormat = GL.GL_RGBA
else:
self.imArray = numpy.array(im.convert("RGB")).astype(numpy.ubyte)
self.internalFormat = GL.GL_RGB
self.dataType = GL.GL_UNSIGNED_BYTE
self._needStrUpdate = True
def flac2wav(path, keep=True):
"""Uncompress: convert .flac file (on disk) to .wav format (new file).
If `path` is a directory name, convert all .flac files in the directory.
`keep` to retain the original .flac file(s), default `True`.
"""
flac_path = _getFlacPath()
flac_files = []
path = pathToString(path)
if path.endswith('.flac'):
flac_files = [path]
elif type(path) == str and os.path.isdir(path):
flac_files = glob.glob(os.path.join(path, '*.flac'))
if len(flac_files) == 0:
logging.warn('failed to find .flac file(s) from %s' % path)
return None
wav_files = []
for flacfile in flac_files:
wavname = flacfile.strip('.flac') + '.wav'
flac_cmd = [flac_path, "-d", "--totally-silent",
"-f", "-o", wavname, flacfile]
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(flacfile)
wav_files.append(wavname)
if len(wav_files) == 1:
return wav_files[0]
else:
return wav_files
def findImageFile(filename):
"""Tests whether the filename is an image file. If not will try some common
alternatives (e.g. extensions .jpg .tif...)
"""
# if user supplied correct path then reutnr quickly
filename = pathToString(filename)
isfile = os.path.isfile
if isfile(filename):
return filename
orig = copy.copy(filename)
# search for file using additional extensions
extensions = ('.jpg', '.png', '.tif', '.bmp', '.gif', '.jpeg', '.tiff')
# not supported: 'svg', 'eps'
def logCorrected(orig, actual):
logging.warn("Requested image {!r} not found but similar filename "
"{!r} exists. This will be used instead but changing the "
"filename is advised.".format(orig, actual))
# it already has one but maybe it's wrong? Remove it
if filename.endswith(extensions):
filename = os.path.splitext(orig)[0]
if isfile(filename):
# had an extension but didn't need one (mac?)
logCorrected(orig, filename)
return filename
# try adding the standard set of extensions
for ext in extensions:
if isfile(filename + ext):
filename += ext
logCorrected(orig, filename)
return filename
def saveAsPickle(self, fileName, fileCollisionMethod='rename'):
"""Basically just saves a copy of the handler (with data) to a
pickle file.
This can be reloaded if necessary and further analyses carried out.
:Parameters:
fileCollisionMethod: Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`
"""
fileName = pathToString(fileName)
if self.thisTrialN < 1 and self.thisRepN < 1:
# if both are < 1 we haven't started
if self.autoLog:
logging.info('.saveAsPickle() called but no trials completed.'
' Nothing saved')
return -1
if not fileName.endswith('.psydat'):
fileName += '.psydat'
with openOutputFile(fileName=fileName,
append=False,
fileCollisionMethod=fileCollisionMethod) as f:
pickle.dump(self, f)
logging.info('saved data to %s' % f.name)
def load(self, pathToMovie):
"""Load a movie file from disk.
Parameters
----------
pathToMovie : str
Path to movie file, stream (URI) or camera. Must be a format that
FFMPEG supports.
"""
# set the file path
self._filename = pathToString(pathToMovie)
# Check if the player is already started. Close it and load a new
# instance if so.
if self._handle is not None: # player already started
# make sure it's the correct type
if not isinstance(self._handle, MediaPlayer):
raise TypeError(
'Incorrect type for `FFMovieStim._player`, expected '
'`ffpyplayer.player.MediaPlayer`. Got type `{}` '
'instead.'.format(type(self._handle).__name__))
# close the player and reset
self.unload()
# self._selectWindow(self.win) # free buffers here !!!
self.start()
self._status = NOT_STARTED
def findImageFile(filename):
"""Tests whether the filename is an image file. If not will try some common
alternatives (e.g. extensions .jpg .tif...)
"""
# if user supplied correct path then reutnr quickly
filename = pathToString(filename)
isfile = os.path.isfile
if isfile(filename):
return filename
orig = copy.copy(filename)
# search for file using additional extensions
extensions = ('.jpg', '.png', '.tif', '.bmp', '.gif', '.jpeg', '.tiff')
# not supported: 'svg', 'eps'
def logCorrected(orig, actual):
logging.warn("Requested image {!r} not found but similar filename "
"{!r} exists. This will be used instead but changing the "
"filename is advised.".format(orig, actual))
# it already has one but maybe it's wrong? Remove it
if filename.endswith(extensions):
filename = os.path.splitext(orig)[0]
if isfile(filename):
# had an extension but didn't need one (mac?)
logCorrected(orig, filename)
return filename
# try adding the standard set of extensions
for ext in extensions:
if isfile(filename+ext):
filename += ext
logCorrected(orig, filename)
return filename
def flac2wav(path, keep=True):
"""Uncompress: convert .flac file (on disk) to .wav format (new file).
If `path` is a directory name, convert all .flac files in the directory.
`keep` to retain the original .flac file(s), default `True`.
"""
flac_path = _getFlacPath()
flac_files = []
path = pathToString(path)
if path.endswith('.flac'):
flac_files = [path]
elif type(path) == str and os.path.isdir(path):
flac_files = glob.glob(os.path.join(path, '*.flac'))
if len(flac_files) == 0:
logging.warn('failed to find .flac file(s) from %s' % path)
return None
wav_files = []
for flacfile in flac_files:
wavname = flacfile.strip('.flac') + '.wav'
flac_cmd = [
flac_path, "-d", "--totally-silent", "-f", "-o", wavname, flacfile
]
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(flacfile)
wav_files.append(wavname)
if len(wav_files) == 1:
return wav_files[0]
else:
return wav_files
def saveAsPickle(self, fileName, fileCollisionMethod='rename'):
"""Basically just saves a copy of the handler (with data) to a
pickle file.
This can be reloaded if necessary and further analyses carried out.
:Parameters:
fileCollisionMethod: Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`
"""
fileName = pathToString(fileName)
if self.thisTrialN < 1 and self.thisRepN < 1:
# if both are < 1 we haven't started
if self.autoLog:
logging.info('.saveAsPickle() called but no trials completed.'
' Nothing saved')
return -1
if not fileName.endswith('.psydat'):
fileName += '.psydat'
with openOutputFile(fileName=fileName, append=False,
fileCollisionMethod=fileCollisionMethod) as f:
pickle.dump(self, f)
logging.info('saved data to %s' % f.name)
def loadMovie(self, filename, log=True):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
After the file is loaded MovieStim.duration is updated with the movie
duration (in seconds).
"""
filename = pathToString(filename)
self._unload()
self._reset()
if self._no_audio is False:
self._createAudioStream()
# Create Video Stream stuff
self._video_stream.open(filename)
vfstime = core.getTime()
opened = self._video_stream.isOpened()
if not opened and core.getTime() - vfstime < 1:
raise RuntimeError("Error when reading image file")
if not opened:
raise RuntimeError("Error when reading image file")
self._total_frame_count = self._video_stream.get(
cv2.CAP_PROP_FRAME_COUNT)
self._video_width = int(self._video_stream.get(
cv2.CAP_PROP_FRAME_WIDTH))
self._video_height = int(self._video_stream.get(
cv2.CAP_PROP_FRAME_HEIGHT))
self._format = self._video_stream.get(
cv2.CAP_PROP_FORMAT)
# TODO: Read depth from video source
self._video_frame_depth = 3
cv_fps = self._video_stream.get(cv2.CAP_PROP_FPS)
self._video_frame_rate = cv_fps
self._inter_frame_interval = 1.0/self._video_frame_rate
# Create a numpy array that can hold one video frame, as returned by
# cv2.
self._numpy_frame = numpy.zeros((self._video_height,
self._video_width,
self._video_frame_depth),
dtype=numpy.uint8)
self.duration = self._total_frame_count * self._inter_frame_interval
self.status = NOT_STARTED
self.filename = filename
logAttrib(self, log, 'movie', filename)
def loadMovie(self, filename, log=True):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
After the file is loaded MovieStim.duration is updated with the movie
duration (in seconds).
"""
filename = pathToString(filename)
self._unload()
self._reset()
if self._no_audio is False:
self._createAudioStream()
# Create Video Stream stuff
self._video_stream.open(filename)
vfstime = core.getTime()
opened = self._video_stream.isOpened()
if not opened and core.getTime() - vfstime < 1:
raise RuntimeError("Error when reading image file")
if not opened:
raise RuntimeError("Error when reading image file")
self._total_frame_count = self._video_stream.get(
cv2.CAP_PROP_FRAME_COUNT)
self._video_width = int(self._video_stream.get(
cv2.CAP_PROP_FRAME_WIDTH))
self._video_height = int(self._video_stream.get(
cv2.CAP_PROP_FRAME_HEIGHT))
self._format = self._video_stream.get(
cv2.CAP_PROP_FORMAT)
# TODO: Read depth from video source
self._video_frame_depth = 3
cv_fps = self._video_stream.get(cv2.CAP_PROP_FPS)
self._video_frame_rate = cv_fps
self._inter_frame_interval = 1.0/self._video_frame_rate
# Create a numpy array that can hold one video frame, as returned by
# cv2.
self._numpy_frame = numpy.zeros((self._video_height,
self._video_width,
self._video_frame_depth),
dtype=numpy.uint8)
self.duration = self._total_frame_count * self._inter_frame_interval
self.status = NOT_STARTED
self.filename = filename
logAttrib(self, log, 'movie', filename)
def __init__(self, name='mic', filename='', saveDir='', sampletype=0,
buffering=16, chnl=0, stereo=True, autoLog=True):
"""
:Parameters:
name :
Stem for the output file, also used in logging.
filename :
optional file name to use; default = 'name-onsetTimeEpoch.wav'
saveDir :
Directory to use for output .wav files.
If a saveDir is given, it will return 'saveDir/file'.
If no saveDir, then return abspath(file)
sampletype : bit depth
pyo recording option:
0=16 bits int, 1=24 bits int; 2=32 bits int
buffering : pyo argument
chnl : which audio input channel to record (default=0)
stereo : how many channels to record
(default True, stereo; False = mono)
"""
if not haveMic:
raise MicrophoneError('Need to call microphone.switchOn()'
' before AudioCapture or AdvancedCapture')
self.name = name
self.saveDir = saveDir
filename = pathToString(filename)
if filename:
self.wavOutFilename = filename
else:
self.wavOutFilename = os.path.join(self.saveDir, name + '.wav')
if not self.saveDir:
self.wavOutFilename = os.path.abspath(self.wavOutFilename)
else:
if not os.path.isdir(self.saveDir):
os.makedirs(self.saveDir, 0o770)
self.onset = None # becomes onset time, used in filename
self.savedFile = False # becomes saved file name
self.status = NOT_STARTED # for Builder component
# pyo server good to go?
if not pyo.serverCreated():
raise AttributeError('pyo server not created')
if not pyo.serverBooted():
raise AttributeError('pyo server not booted')
self.autoLog = autoLog
self.loggingId = self.__class__.__name__
if self.name:
self.loggingId += ' ' + self.name
# the recorder object needs to persist, or else get bus errors:
self.recorder = self._Recorder()
self.options = {'sampletype': sampletype, 'buffering': buffering,
'chnl': chnl, 'chnls': 1 + int(stereo == True)}
def loadMovie(self, filename, log=True):
"""Load a movie from file.
After the file is loaded `MovieStim.duration` is updated with the movie
duration (in seconds).
Parameters
----------
filename : str
The name of the file, including path if necessary.
log : bool
Log this event.
"""
filename = pathToString(filename)
self.reset() # set status and timestamps etc
self._mov = None
# Create Video Stream stuff
if os.path.isfile(filename):
self._mov = VideoFileClip(filename, audio=(1 - self.noAudio))
if (not self.noAudio) and (self._mov.audio is not None):
sound = self.sound
try:
self._audioStream = sound.Sound(
self._mov.audio.to_soundarray(),
sampleRate=self._mov.audio.fps)
except:
# JWE added this as a patch for a moviepy oddity where the
# duration is inflated in the saved file causes the
# audioclip to be the wrong length, so round down and it
# should work
jwe_tmp = self._mov.subclip(0, round(self._mov.duration))
self._audioStream = sound.Sound(
jwe_tmp.audio.to_soundarray(),
sampleRate=self._mov.audio.fps)
del(jwe_tmp)
else: # make sure we set to None (in case prev clip had audio)
self._audioStream = None
elif not filename.startswith(prefs.paths['resources']):
# If not found, and we aren't already looking in the Resources folder, try again in the Resources folder
self.loadMovie(Path(prefs.paths['resources']) / filename, log=False)
else:
# Raise error if *still* not found
raise IOError("Movie file '%s' was not found" % filename)
# mov has attributes:
# size, duration, fps
# mov.audio has attributes
# duration, fps (aka sampleRate), to_soundarray()
self._frameInterval = 1.0 / self._mov.fps
# self.duration = self._mov.duration
self.filename = filename
self._updateFrameTexture()
logAttrib(self, log, 'movie', filename)
def run(self, filename, sec, sampletype=0, buffering=16,
chnl=0, chnls=2):
filename = pathToString(filename)
self.running = True
# chnl from psychopy.sound.backend.get_input_devices()
inputter = pyo.Input(chnl=chnl, mul=1)
self.recorder = pyo.Record(inputter, filename, chnls=chnls,
fileformat=0, sampletype=sampletype,
buffering=buffering)
# handles recording offset
pyo.Clean_objects(sec, self.recorder).start()
threading.Timer(sec, self._stop).start() # set running flag False
def saveAsJson(self,
fileName=None,
encoding='utf-8',
fileCollisionMethod='rename'):
"""
Serialize the object to the JSON format.
Parameters
----------
fileName: string, or None
the name of the file to create or append. Can include a relative or
absolute path. If `None`, will not write to a file, but return an
in-memory JSON object.
encoding : string, optional
The encoding to use when writing the file. This parameter will be
ignored if `append` is `False` and `fileName` ends with `.psydat`
or `.npy` (i.e. if a binary file is to be written).
fileCollisionMethod : string
Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`. Can be
either of `'rename'`, `'overwrite'`, or `'fail'`.
Notes
-----
Currently, a copy of the object is created, and the copy's .origin
attribute is set to an empty string before serializing
because loading the created JSON file would sometimes fail otherwise.
"""
fileName = pathToString(fileName)
self_copy = copy.deepcopy(self)
self_copy.origin = ''
msg = ('Setting attribute .origin to empty string during JSON '
'serialization.')
logging.warn(msg)
if (fileName is None) or (fileName == 'stdout'):
return json_tricks.dumps(self_copy)
else:
with openOutputFile(fileName=fileName,
fileCollisionMethod=fileCollisionMethod,
encoding=encoding) as f:
json_tricks.dump(self_copy, f)
logging.info('Saved JSON data to %s' % f.name)
def _assertValidVarNames(fieldNames, fileName):
"""screens a list of names as candidate variable names. if all
names are OK, return silently; else raise with msg
"""
fileName = pathToString(fileName)
if not all(fieldNames):
msg = ('Conditions file %s: Missing parameter name(s); '
'empty cell(s) in the first row?')
raise ValueError(msg % fileName)
for name in fieldNames:
OK, msg = isValidVariableName(name)
if not OK:
# tailor message to importConditions
msg = msg.replace('Variables', 'Parameters (column headers)')
raise ValueError('Conditions file %s: %s%s"%s"' %
(fileName, msg, os.linesep * 2, name))
def _assertValidVarNames(fieldNames, fileName):
"""screens a list of names as candidate variable names. if all
names are OK, return silently; else raise with msg
"""
fileName = pathToString(fileName)
if not all(fieldNames):
msg = ('Conditions file %s: Missing parameter name(s); '
'empty cell(s) in the first row?')
raise ValueError(msg % fileName)
for name in fieldNames:
OK, msg = isValidVariableName(name)
if not OK:
# tailor message to importConditions
msg = msg.replace('Variables', 'Parameters (column headers)')
raise ValueError('Conditions file %s: %s%s"%s"' %
(fileName, msg, os.linesep * 2, name))
def saveAsJson(self,
fileName=None,
encoding='utf-8',
fileCollisionMethod='rename'):
"""
Serialize the object to the JSON format.
Parameters
----------
fileName: string, or None
the name of the file to create or append. Can include a relative or
absolute path. If `None`, will not write to a file, but return an
in-memory JSON object.
encoding : string, optional
The encoding to use when writing the file.
fileCollisionMethod : string
Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`. Can be
either of `'rename'`, `'overwrite'`, or `'fail'`.
Notes
-----
Currently, a copy of the object is created, and the copy's .origin
attribute is set to an empty string before serializing
because loading the created JSON file would sometimes fail otherwise.
"""
fileName = pathToString(fileName)
self_copy = copy.deepcopy(self)
self_copy.origin = ''
msg = ('Setting attribute .origin to empty string during JSON '
'serialization.')
logging.warn(msg)
if (fileName is None) or (fileName == 'stdout'):
return json_tricks.dumps(self_copy)
else:
with openOutputFile(fileName=fileName,
fileCollisionMethod=fileCollisionMethod,
encoding=encoding) as f:
json_tricks.dump(self_copy, f)
logging.info('Saved JSON data to %s' % f.name)
def loadMovie(self, filename, log=True):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
After the file is loaded MovieStim.duration is updated with the movie
duration (in seconds).
"""
filename = pathToString(filename)
self.reset() # set status and timestamps etc
# Create Video Stream stuff
if os.path.isfile(filename):
self._mov = VideoFileClip(filename, audio=(1 - self.noAudio))
if (not self.noAudio) and (self._mov.audio is not None):
sound = self.sound
try:
self._audioStream = sound.Sound(
self._mov.audio.to_soundarray(),
sampleRate=self._mov.audio.fps)
except:
# JWE added this as a patch for a moviepy oddity where the
# duration is inflated in the saved file causes the
# audioclip to be the wrong length, so round down and it
# should work
jwe_tmp = self._mov.subclip(0, round(self._mov.duration))
self._audioStream = sound.Sound(
jwe_tmp.audio.to_soundarray(),
sampleRate=self._mov.audio.fps)
del(jwe_tmp)
else: # make sure we set to None (in case prev clip had audio)
self._audioStream = None
else:
raise IOError("Movie file '%s' was not found" % filename)
# mov has attributes:
# size, duration, fps
# mov.audio has attributes
# duration, fps (aka sampleRate), to_soundarray()
self._frameInterval = 1.0/self._mov.fps
self.duration = self._mov.duration
self.filename = filename
self._updateFrameTexture()
logAttrib(self, log, 'movie', filename)
def loadMovie(self, filename, log=True):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
After the file is loaded MovieStim.duration is updated with the movie
duration (in seconds).
"""
filename = pathToString(filename)
self.reset() # set status and timestamps etc
# Create Video Stream stuff
if os.path.isfile(filename):
self._mov = VideoFileClip(filename, audio=(1 - self.noAudio))
if (not self.noAudio) and (self._mov.audio is not None):
sound = self.sound
try:
self._audioStream = sound.Sound(
self._mov.audio.to_soundarray(),
sampleRate=self._mov.audio.fps)
except:
# JWE added this as a patch for a moviepy oddity where the
# duration is inflated in the saved file causes the
# audioclip to be the wrong length, so round down and it
# should work
jwe_tmp = self._mov.subclip(0, round(self._mov.duration))
self._audioStream = sound.Sound(
jwe_tmp.audio.to_soundarray(),
sampleRate=self._mov.audio.fps)
del (jwe_tmp)
else: # make sure we set to None (in case prev clip had audio)
self._audioStream = None
else:
raise IOError("Movie file '%s' was not found" % filename)
# mov has attributes:
# size, duration, fps
# mov.audio has attributes
# duration, fps (aka sampleRate), to_soundarray()
self._frameInterval = 1.0 / self._mov.fps
self.duration = self._mov.duration
self.filename = filename
self._updateFrameTexture()
logAttrib(self, log, 'movie', filename)
def loadMovie(self, filename, log=True):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
Due to VLC oddness, .duration is not correct until the movie starts playing.
"""
self._reset()
self.filename = pathToString(filename)
# Initialize VLC
self._vlc_start()
self.status = NOT_STARTED
logAttrib(self, log, 'movie', filename)
def wav2flac(path, keep=True, level=5):
"""Lossless compression: convert .wav file (on disk) to .flac format.
If `path` is a directory name, convert all .wav files in the directory.
`keep` to retain the original .wav file(s), default `True`.
`level` is compression level: 0 is fastest but larger,
8 is slightly smaller but much slower.
"""
flac_path = _getFlacPath()
wav_files = []
path = pathToString(path)
if path.endswith('.wav'):
wav_files = [path]
elif type(path) == str and os.path.isdir(path):
wav_files = glob.glob(os.path.join(path, '*.wav'))
if len(wav_files) == 0:
logging.warn('failed to find .wav file(s) from %s' % path)
return None
flac_files = []
for wavname in wav_files:
flacfile = wavname.replace('.wav', '.flac')
flac_cmd = [
flac_path,
"-%d" % level, "-f", "--totally-silent", "-o", flacfile, wavname
]
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se or not os.path.isfile(flacfile): # just try again
# ~2% incidence when recording for 1s, 650+ trials
# never got two in a row; core.wait() does not help
logging.warn('Failed to convert to .flac; trying again')
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(wavname)
flac_files.append(flacfile)
if len(wav_files) == 1:
return flac_files[0]
else:
return flac_files
def run(self,
filename,
sec,
sampletype=0,
buffering=16,
chnl=0,
chnls=2):
filename = pathToString(filename)
self.running = True
# chnl from psychopy.backend_pyo.get_input_devices()
inputter = pyo.Input(chnl=chnl, mul=1)
self.recorder = pyo.Record(inputter,
filename,
chnls=chnls,
fileformat=0,
sampletype=sampletype,
buffering=buffering)
# handles recording offset
pyo.Clean_objects(sec, self.recorder).start()
threading.Timer(sec, self._stop).start() # set running flag False
def _record(self, sec, filename='', block=True, log=True):
filename = pathToString(filename)
while self.recorder.running:
pass
self.duration = float(sec)
# for duration estimation, high precision:
self.onset = core.getTime()
# use time for unique log and filename, 1 sec precision
self.fileOnset = core.getAbsTime()
ms = "%.3f" % (core.getTime() - int(core.getTime()))
if log and self.autoLog:
msg = '%s: Record: onset %d, capture %.3fs'
logging.data(msg % (self.loggingId, self.fileOnset,
self.duration))
if not filename:
onsettime = '-%d' % self.fileOnset + ms[1:]
self.savedFile = onsettime.join(
os.path.splitext(self.wavOutFilename))
else:
self.savedFile = os.path.abspath(filename)
if not self.savedFile.endswith('.wav'):
self.savedFile += '.wav'
t0 = core.getTime()
self.recorder.run(self.savedFile, self.duration, **self.options)
self.rate = sound.backend.pyoSndServer.getSamplingRate()
if block:
core.wait(self.duration, 0)
if log and self.autoLog:
msg = '%s: Record: stop. %.3f, capture %.3fs (est)'
logging.exp(msg % (self.loggingId, core.getTime(),
core.getTime() - t0))
while self.recorder.running:
core.wait(.001, 0)
else:
if log and self.autoLog:
msg = '%s: Record: return immediately, no blocking'
logging.exp(msg % (self.loggingId))
return self.savedFile
def _record(self, sec, filename='', block=True, log=True):
filename = pathToString(filename)
while self.recorder.running:
pass
self.duration = float(sec)
# for duration estimation, high precision:
self.onset = core.getTime()
# use time for unique log and filename, 1 sec precision
self.fileOnset = core.getAbsTime()
ms = "%.3f" % (core.getTime() - int(core.getTime()))
if log and self.autoLog:
msg = '%s: Record: onset %d, capture %.3fs'
logging.data(msg % (self.loggingId, self.fileOnset, self.duration))
if not filename:
onsettime = '-%d' % self.fileOnset + ms[1:]
self.savedFile = onsettime.join(
os.path.splitext(self.wavOutFilename))
else:
self.savedFile = os.path.abspath(filename)
if not self.savedFile.endswith('.wav'):
self.savedFile += '.wav'
t0 = core.getTime()
self.recorder.run(self.savedFile, self.duration, **self.options)
self.rate = backend_pyo.pyoSndServer.getSamplingRate()
if block:
core.wait(self.duration, 0)
if log and self.autoLog:
msg = '%s: Record: stop. %.3f, capture %.3fs (est)'
logging.exp(
msg %
(self.loggingId, core.getTime(), core.getTime() - t0))
while self.recorder.running:
core.wait(.001, 0)
else:
if log and self.autoLog:
msg = '%s: Record: return immediately, no blocking'
logging.exp(msg % (self.loggingId))
return self.savedFile
def readWavFile(filename):
"""Return (data, sampleRate) as read from a wav file, expects int16 data.
"""
filename = pathToString(filename)
try:
sampleRate, data = wavfile.read(filename)
except Exception:
if os.path.exists(filename) and os.path.isfile(filename):
core.wait(0.01, 0)
try:
sampleRate, data = wavfile.read(filename)
except Exception:
msg = 'Failed to open wav sound file "%s"'
raise SoundFileError(msg % filename)
if data.dtype != 'int16':
msg = 'expected `int16` data in .wav file %s'
raise AttributeError(msg % filename)
if len(data.shape) == 2 and data.shape[1] == 2:
data = data.transpose()
data = data[0] # left channel only? depends on how the file was made
return data, sampleRate
def readWavFile(filename):
"""Return (data, sampleRate) as read from a wav file, expects int16 data.
"""
filename = pathToString(filename)
try:
sampleRate, data = wavfile.read(filename)
except Exception:
if os.path.exists(filename) and os.path.isfile(filename):
core.wait(0.01, 0)
try:
sampleRate, data = wavfile.read(filename)
except Exception:
msg = 'Failed to open wav sound file "%s"'
raise SoundFileError(msg % filename)
if data.dtype != 'int16':
msg = 'expected `int16` data in .wav file %s'
raise AttributeError(msg % filename)
if len(data.shape) == 2 and data.shape[1] == 2:
data = data.transpose()
data = data[0] # left channel only? depends on how the file was made
return data, sampleRate
def wav2flac(path, keep=True, level=5):
"""Lossless compression: convert .wav file (on disk) to .flac format.
If `path` is a directory name, convert all .wav files in the directory.
`keep` to retain the original .wav file(s), default `True`.
`level` is compression level: 0 is fastest but larger,
8 is slightly smaller but much slower.
"""
flac_path = _getFlacPath()
wav_files = []
path = pathToString(path)
if path.endswith('.wav'):
wav_files = [path]
elif type(path) == str and os.path.isdir(path):
wav_files = glob.glob(os.path.join(path, '*.wav'))
if len(wav_files) == 0:
logging.warn('failed to find .wav file(s) from %s' % path)
return None
flac_files = []
for wavname in wav_files:
flacfile = wavname.replace('.wav', '.flac')
flac_cmd = [flac_path, "-%d" % level, "-f",
"--totally-silent", "-o", flacfile, wavname]
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se or not os.path.isfile(flacfile): # just try again
# ~2% incidence when recording for 1s, 650+ trials
# never got two in a row; core.wait() does not help
logging.warn('Failed to convert to .flac; trying again')
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(wavname)
flac_files.append(flacfile)
if len(wav_files) == 1:
return flac_files[0]
else:
return flac_files
def loadMovie(self, filename, log=True):
"""Load a movie from file
Parameters
----------
filename : str
The name of the file or URL, including path if necessary.
log : bool
Log this event.
Notes
-----
* Due to VLC oddness, `.duration` is not correct until the movie starts
playing.
"""
self._filename = pathToString(filename)
# open the media using a new player
self._openMedia()
self.status = NOT_STARTED
logAttrib(self, log, 'movie', filename)
def loadMovie(self, filename, log=None):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
Brings up a warning if avbin is not found on the computer.
After the file is loaded MovieStim.duration is updated with the movie
duration (in seconds).
"""
filename = pathToString(filename)
try:
self._movie = pyglet.media.load(filename, streaming=True)
except Exception as e:
# pyglet.media.riff is N/A if avbin is available, and then
# actual exception would get masked with a new one for unknown
# (sub)module riff, thus catching any exception and tuning msg
# up if it has to do anything with avbin
estr = str(e)
msg = ''
if "avbin" in estr.lower():
msg = ("\nIt seems that avbin was not installed correctly."
"\nPlease fetch/install it from "
"http://code.google.com/p/avbin/.")
emsg = "Caught exception '%s' while loading file '%s'.%s"
raise IOError(emsg % (estr, filename, msg))
self._player.queue(self._movie)
self.duration = self._movie.duration
while self._player.source != self._movie:
next(self._player)
self.status = NOT_STARTED
self._player.pause() # start 'playing' on the next draw command
self.filename = filename
logAttrib(self, log, 'movie', filename)
def loadMovie(self, filename, log=None):
"""Load a movie from file
:Parameters:
filename: string
The name of the file, including path if necessary
Brings up a warning if avbin is not found on the computer.
After the file is loaded MovieStim.duration is updated with the movie
duration (in seconds).
"""
filename = pathToString(filename)
try:
self._movie = pyglet.media.load(filename, streaming=True)
except Exception as e:
# pyglet.media.riff is N/A if avbin is available, and then
# actual exception would get masked with a new one for unknown
# (sub)module riff, thus catching any exception and tuning msg
# up if it has to do anything with avbin
estr = str(e)
msg = ''
if "avbin" in estr.lower():
msg = ("\nIt seems that avbin was not installed correctly."
"\nPlease fetch/install it from "
"http://code.google.com/p/avbin/.")
emsg = "Caught exception '%s' while loading file '%s'.%s"
raise IOError(emsg % (estr, filename, msg))
self._player.queue(self._movie)
self.duration = self._movie.duration
while self._player.source != self._movie:
next(self._player)
self.status = NOT_STARTED
self._player.pause() # start 'playing' on the next draw command
self.filename = filename
logAttrib(self, log, 'movie', filename)
def __init__(self,
win,
filename="",
movieLib=u'ffpyplayer',
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
anchor="center",
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0), # remove?
colorSpace='rgb',
opacity=1.0,
contrast=1,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
interpolate=True,
autoStart=True):
# # check if we have the VLC lib
# if not haveFFPyPlayer:
# raise ImportError(
# 'Cannot import package `ffpyplayer`, therefore `FFMovieStim` '
# 'cannot be used this session.')
# what local vars are defined (these are the init params) for use
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim, self).__init__(
win, units=units, name=name, autoLog=False)
# drawing stuff
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = pos
self.ori = ori
self.size = size
self.depth = depth
self.opacity = opacity
self.anchor = anchor
self.colorSpace = colorSpace
self.color = color
# playback stuff
self._filename = pathToString(filename)
self._volume = volume
self._noAudio = noAudio # cannot be changed
self.loop = loop
self._recentFrame = None
self._autoStart = autoStart
# OpenGL data
self.interpolate = True
self._texFilterNeedsUpdate = True
self._metadata = NULL_MOVIE_METADATA
self._pixbuffId = GL.GLuint(0)
self._textureId = GL.GLuint(0)
# get the player interface for the desired `movieLib` and instance it
self._player = getMoviePlayer(movieLib)(self)
# load a file if provided, otherwise the user must call `setMovie()`
self._filename = pathToString(filename)
if self._filename: # load a movie if provided
self.loadMovie(self._filename)
def __init__(self, win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
vframe_callback=None,
fps=None,
interpolate=True):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 100, and 0 is silence.
loop : bool, optional
Whether to start the movie over from the beginning if draw is
called and the movie is done.
"""
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim2, self).__init__(win, units=units, name=name,
autoLog=False)
# check for pyglet
if win.winType != 'pyglet':
logging.error(
'Movie stimuli can only be used with a pyglet window')
core.quit()
self._retracerate = win._monitorFrameRate
if self._retracerate is None:
self._retracerate = win.getActualFrameRate()
if self._retracerate is None:
logging.warning("FrameRate could not be supplied by psychopy; "
"defaulting to 60.0")
self._retracerate = 60.0
self.filename = pathToString(filename)
self.loop = loop
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
self.depth = depth
self.opacity = float(opacity)
self.volume = volume
self._av_stream_time_offset = 0.145
self._no_audio = noAudio
self._vframe_callback = vframe_callback
self.interpolate = interpolate
self.useTexSubImage2D = True
self._texID = None
self._video_stream = cv2.VideoCapture()
self._reset()
self.loadMovie(self.filename)
self.setVolume(volume)
self.nDroppedFrames = 0
self.aspectRatio = self._video_width/float(self._video_height)
# size
if size is None:
self.size = numpy.array([self._video_width, self._video_height],
float)
elif isinstance(size, (int, float, int)):
# treat size as desired width, and calc a height
# that maintains the aspect ratio of the video.
self.size = numpy.array([size, size/self.aspectRatio], float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created {} = {}".format(self.name, self))
def __init__(
self,
win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name=None,
loop=False,
autoLog=None,
depth=0.0,
):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
Can be any movie that AVbin can read (e.g. mpeg, DivX)
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 1.0, and 0.0 is silence,
see pyglet.media.Player
loop : bool, optional
Whether to start the movie over from the beginning
if draw is called and the movie is done.
"""
# what local vars are defined (these are the init params) for use by
# __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim, self).__init__(win,
units=units,
name=name,
autoLog=False)
self._verticesBase *= numpy.array([[-1, 1]]) # unflip
if not havePygletMedia:
msg = ("pyglet.media is needed for MovieStim and could not be"
" imported.\nThis can occur for various reasons;"
" - psychopy.visual was imported too late (after a lib"
" that uses scipy)"
" - no audio output is enabled (no audio card or no "
"speakers attached)"
" - avbin is not installed")
raise ImportError(msg)
self._movie = None # the actual pyglet media object
self._player = pyglet.media.ManagedSoundPlayer()
self._player.volume = volume
try:
self._player_default_on_eos = self._player.on_eos
except Exception:
# pyglet 1.1.4?
self._player_default_on_eos = self._player._on_eos
self.filename = pathToString(filename)
self.duration = None
self.loop = loop
if loop and pyglet.version >= '1.2':
logging.error("looping of movies is not currently supported "
"for pyglet >= 1.2 (only for version 1.1.4)")
self.loadMovie(self.filename)
self.format = self._movie.video_format
self.pos = numpy.asarray(pos, float)
self.depth = depth
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.opacity = float(opacity)
self.status = NOT_STARTED
# size
if size is None:
self.size = numpy.array([self.format.width, self.format.height],
float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
if win.winType != 'pyglet':
logging.error('Movie stimuli can only be used with a '
'pyglet window')
core.quit()
# set autoLog now that params have been initialised
wantLog = autoLog is None and self.win.autoLog
self.__dict__['autoLog'] = autoLog or wantLog
if self.autoLog:
logging.exp("Created %s = %s" % (self.name, str(self)))
def setImage(self, filename=None, log=None):
"""Usually you can use 'stim.attribute = value' syntax instead,
but use this method if you need to suppress the log message.
"""
filename = pathToString(filename)
setAttribute(self, 'image', filename, log)
def saveAsText(self, fileName,
stimOut=None,
dataOut=('n', 'all_mean', 'all_std', 'all_raw'),
delim=None,
matrixOnly=False,
appendFile=True,
summarised=True,
fileCollisionMethod='rename',
encoding='utf-8-sig'):
"""
Write a text file with the data and various chosen stimulus attributes
:Parameters:
fileName:
will have .tsv appended and can include path info.
stimOut:
the stimulus attributes to be output. To use this you need to
use a list of dictionaries and give here the names of dictionary
keys that you want as strings
dataOut:
a list of strings specifying the dataType and the analysis to
be performed,in the form `dataType_analysis`. The data can be
any of the types that you added using trialHandler.data.add()
and the analysis can be either 'raw' or most things in the
numpy library, including; 'mean','std','median','max','min'...
The default values will output the raw, mean and std of all
datatypes found
delim:
allows the user to use a delimiter other than tab
("," is popular with file extension ".csv")
matrixOnly:
outputs the data with no header row or extraInfo attached
appendFile:
will add this output to the end of the specified file if
it already exists
fileCollisionMethod:
Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`
encoding:
The encoding to use when saving a the file. Defaults to `utf-8-sig`.
"""
fileName = pathToString(fileName)
if stimOut is None:
stimOut = []
if self.thisTrialN < 1 and self.thisRepN < 1:
# if both are < 1 we haven't started
if self.autoLog:
logging.info('TrialHandler.saveAsText called but no trials'
' completed. Nothing saved')
return -1
dataArray = self._createOutputArray(stimOut=stimOut,
dataOut=dataOut,
matrixOnly=matrixOnly)
# set default delimiter if none given
if delim is None:
delim = genDelimiter(fileName)
# create the file or send to stdout
fileName = genFilenameFromDelimiter(fileName, delim)
with openOutputFile(fileName=fileName, append=appendFile,
fileCollisionMethod=fileCollisionMethod,
encoding=encoding) as f:
# loop through lines in the data matrix
for line in dataArray:
for cellN, entry in enumerate(line):
# surround in quotes to prevent effect of delimiter
if delim in str(entry):
f.write(u'"%s"' % str(entry))
else:
f.write(str(entry))
if cellN < (len(line) - 1):
f.write(delim)
f.write("\n") # add an EOL at end of each line
if (fileName is not None) and (fileName != 'stdout') and self.autoLog:
logging.info('saved data to %s' % f.name)
def __init__(self,
win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
anchor="center",
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
vframe_callback=None,
fps=None,
interpolate=True):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 100, and 0 is silence.
loop : bool, optional
Whether to start the movie over from the beginning if draw is
called and the movie is done.
"""
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim2, self).__init__(win,
units=units,
name=name,
autoLog=False)
# check for pyglet
if win.winType != 'pyglet':
logging.error(
'Movie stimuli can only be used with a pyglet window')
core.quit()
self._retracerate = win._monitorFrameRate
if self._retracerate is None:
self._retracerate = win.getActualFrameRate()
if self._retracerate is None:
logging.warning("FrameRate could not be supplied by psychopy; "
"defaulting to 60.0")
self._retracerate = 60.0
self.filename = pathToString(filename)
self.loop = loop
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
self.anchor = anchor
self.depth = depth
self.opacity = float(opacity)
self.volume = volume
self._av_stream_time_offset = 0.145
self._no_audio = noAudio
self._vframe_callback = vframe_callback
self.interpolate = interpolate
self.useTexSubImage2D = True
self._texID = None
self._video_stream = cv2.VideoCapture()
self._reset()
self.loadMovie(self.filename)
self.setVolume(volume)
self.nDroppedFrames = 0
self.aspectRatio = self._video_width / float(self._video_height)
# size
if size is None:
self.size = numpy.array([self._video_width, self._video_height],
float)
elif isinstance(size, (int, float, int)):
# treat size as desired width, and calc a height
# that maintains the aspect ratio of the video.
self.size = numpy.array([size, size / self.aspectRatio], float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created {} = {}".format(self.name, self))
def __init__(self,
name='mic',
filename='',
saveDir='',
sampletype=0,
buffering=16,
chnl=0,
stereo=True,
autoLog=True):
"""
:Parameters:
name :
Stem for the output file, also used in logging.
filename :
optional file name to use; default = 'name-onsetTimeEpoch.wav'
saveDir :
Directory to use for output .wav files.
If a saveDir is given, it will return 'saveDir/file'.
If no saveDir, then return abspath(file)
sampletype : bit depth
pyo recording option:
0=16 bits int, 1=24 bits int; 2=32 bits int
buffering : pyo argument
chnl : which audio input channel to record (default=0)
stereo : how many channels to record
(default True, stereo; False = mono)
"""
if not haveMic:
raise MicrophoneError('Need to call microphone.switchOn()'
' before AudioCapture or AdvancedCapture')
self.name = name
self.saveDir = saveDir
filename = pathToString(filename)
if filename:
self.wavOutFilename = filename
else:
self.wavOutFilename = os.path.join(self.saveDir, name + '.wav')
if not self.saveDir:
self.wavOutFilename = os.path.abspath(self.wavOutFilename)
else:
if not os.path.isdir(self.saveDir):
os.makedirs(self.saveDir, 0o770)
self.onset = None # becomes onset time, used in filename
self.savedFile = False # becomes saved file name
self.status = NOT_STARTED # for Builder component
# pyo server good to go?
if not pyo.serverCreated():
raise AttributeError('pyo server not created')
if not pyo.serverBooted():
raise AttributeError('pyo server not booted')
self.autoLog = autoLog
self.loggingId = self.__class__.__name__
if self.name:
self.loggingId += ' ' + self.name
if type(chnl) != int:
try:
chnl = int(chnl)
except (TypeError, ValueError):
raise TypeError(
"AudioCapture argument 'chnl' needs to be an int but received {}"
.format(repr(chnl)))
# the recorder object needs to persist, or else get bus errors:
self.recorder = self._Recorder()
self.options = {
'sampletype': sampletype,
'buffering': buffering,
'chnl': chnl,
'chnls': 1 + int(stereo == True)
}
def saveAsExcel(self, fileName, sheetName='rawData',
stimOut=None,
dataOut=('n', 'all_mean', 'all_std', 'all_raw'),
matrixOnly=False,
appendFile=True,
fileCollisionMethod='rename'):
"""
Save a summary data file in Excel OpenXML format workbook
(:term:`xlsx`) for processing in most spreadsheet packages.
This format is compatible with versions of Excel (2007 or greater)
and and with OpenOffice (>=3.0).
It has the advantage over the simpler text files (see
:func:`TrialHandler.saveAsText()` )
that data can be stored in multiple named sheets within the file.
So you could have a single file named after your experiment and
then have one worksheet for each participant. Or you could have
one file for each participant and then multiple sheets for
repeated sessions etc.
The file extension `.xlsx` will be added if not given already.
:Parameters:
fileName: string
the name of the file to create or append. Can include
relative or absolute path
sheetName: string
the name of the worksheet within the file
stimOut: list of strings
the attributes of the trial characteristics to be output.
To use this you need to have provided a list of dictionaries
specifying to trialList parameter of the TrialHandler and
give here the names of strings specifying entries in that
dictionary
dataOut: list of strings
specifying the dataType and the analysis to
be performed, in the form `dataType_analysis`. The data
can be any of the types that you added using
trialHandler.data.add() and the analysis can be either
'raw' or most things in the numpy library, including
'mean','std','median','max','min'. e.g. `rt_max` will give
a column of max reaction times across the trials assuming
that `rt` values have been stored. The default values will
output the raw, mean and std of all datatypes found.
appendFile: True or False
If False any existing file with this name will be
overwritten. If True then a new worksheet will be appended.
If a worksheet already exists with that name a number will
be added to make it unique.
fileCollisionMethod: string
Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`
This is ignored if ``append`` is ``True``.
"""
fileName = pathToString(fileName)
if stimOut is None:
stimOut = []
if self.thisTrialN < 1 and self.thisRepN < 1:
# if both are < 1 we haven't started
if self.autoLog:
logging.info('TrialHandler.saveAsExcel called but no '
'trials completed. Nothing saved')
return -1
# NB this was based on the limited documentation (1 page wiki) for
# openpyxl v1.0
if not haveOpenpyxl:
raise ImportError('openpyxl is required for saving files in'
' Excel (xlsx) format, but was not found.')
# return -1
# create the data array to be sent to the Excel file
dataArray = self._createOutputArray(stimOut=stimOut,
dataOut=dataOut,
matrixOnly=matrixOnly)
if not fileName.endswith('.xlsx'):
fileName += '.xlsx'
# create or load the file
if appendFile and os.path.isfile(fileName):
wb = load_workbook(fileName)
newWorkbook = False
else:
if not appendFile:
# the file exists but we're not appending, will be overwritten
fileName = handleFileCollision(fileName,
fileCollisionMethod)
wb = Workbook() # create new workbook
wb.properties.creator = 'PsychoPy' + psychopy.__version__
newWorkbook = True
if newWorkbook:
ws = wb.worksheets[0]
ws.title = sheetName
else:
ws = wb.create_sheet()
ws.title = sheetName
# loop through lines in the data matrix
for lineN, line in enumerate(dataArray):
if line is None:
continue
for colN, entry in enumerate(line):
if entry is None:
entry = ''
try:
# if it can convert to a number (from numpy) then do it
val = float(entry)
except Exception:
val = u"{}".format(entry)
ws.cell(column=colN+1, row=lineN+1, value=val)
wb.save(filename=fileName)
def __init__(self,
win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
anchor="center",
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
vframe_callback=None,
fps=None,
interpolate=True):
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim3, self).__init__(win,
units=units,
name=name,
autoLog=False)
retraceRate = win._monitorFrameRate
if retraceRate is None:
retraceRate = win.getActualFrameRate()
if retraceRate is None:
logging.warning("FrameRate could not be supplied by psychopy; "
"defaulting to 60.0")
retraceRate = 60.0
self._retraceInterval = 1.0 / retraceRate
self.filename = pathToString(filename)
self.loop = loop
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
self.anchor = anchor
self.depth = depth
self.opacity = opacity
self.interpolate = interpolate
self.noAudio = noAudio
self._audioStream = None
self.useTexSubImage2D = True
if noAudio: # to avoid dependency problems in silent movies
self.sound = None
else:
from psychopy import sound
self.sound = sound
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created %s = %s" % (self.name, str(self)))
self._videoClock = Clock()
self.loadMovie(self.filename)
self.setVolume(volume)
self.nDroppedFrames = 0
# size
if size is None:
self.size = numpy.array([self._mov.w, self._mov.h], float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
def __init__(self, win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name=None,
loop=False,
autoLog=None,
depth=0.0,):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
Can be any movie that AVbin can read (e.g. mpeg, DivX)
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 1.0, and 0.0 is silence,
see pyglet.media.Player
loop : bool, optional
Whether to start the movie over from the beginning
if draw is called and the movie is done.
"""
# what local vars are defined (these are the init params) for use by
# __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim, self).__init__(
win, units=units, name=name, autoLog=False)
self._verticesBase *= numpy.array([[-1, 1]]) # unflip
if not havePygletMedia:
msg = ("pyglet.media is needed for MovieStim and could not be"
" imported.\nThis can occur for various reasons;"
" - psychopy.visual was imported too late (after a lib"
" that uses scipy)"
" - no audio output is enabled (no audio card or no "
"speakers attached)"
" - avbin is not installed")
raise ImportError(msg)
self._movie = None # the actual pyglet media object
self._player = pyglet.media.ManagedSoundPlayer()
self._player.volume = volume
try:
self._player_default_on_eos = self._player.on_eos
except Exception:
# pyglet 1.1.4?
self._player_default_on_eos = self._player._on_eos
self.filename = pathToString(filename)
self.duration = None
self.loop = loop
if loop and pyglet.version >= '1.2':
logging.error("looping of movies is not currently supported "
"for pyglet >= 1.2 (only for version 1.1.4)")
self.loadMovie(self.filename)
self.format = self._movie.video_format
self.pos = numpy.asarray(pos, float)
self.depth = depth
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.opacity = float(opacity)
self.status = NOT_STARTED
# size
if size is None:
self.size = numpy.array([self.format.width, self.format.height],
float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
if win.winType != 'pyglet':
logging.error('Movie stimuli can only be used with a '
'pyglet window')
core.quit()
# set autoLog now that params have been initialised
wantLog = autoLog is None and self.win.autoLog
self.__dict__['autoLog'] = autoLog or wantLog
if self.autoLog:
logging.exp("Created %s = %s" % (self.name, str(self)))
def __init__(self, win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0), # remove?
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
interpolate=True,
autoStart=True):
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(VlcMovieStim, self).__init__(win, units=units, name=name,
autoLog=False)
# check for pyglet
if win.winType != 'pyglet':
logging.error('Movie stimuli can only be used with a pyglet window')
core.quit()
# drawing stuff
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
# original size to keep BaseVisualStim happy
self._origSize = numpy.asarray((128, 128,), float)
# Defer setting size until after the video is loaded to use it's native
# size instead of the one set by the user.
self._useFrameSizeFromVideo = size is None
if not self._useFrameSizeFromVideo:
self.size = numpy.asarray(size, float)
self.depth = depth
self.opacity = float(opacity)
# playback stuff
self._filename = pathToString(filename)
self._volume = volume
self._noAudio = noAudio # cannot be changed
self._currentFrame = -1
self._loopCount = 0
self.loop = loop
# video pixel and texture buffer variables, setup later
self.interpolate = interpolate # use setter
self._textureId = GL.GLuint()
self._pixbuffId = GL.GLuint()
# VLC related attributes
self._instance = None
self._player = None
self._manager = None
self._stream = None
self._videoWidth = 0
self._videoHeight = 0
self._frameRate = 0.0
self._vlcInitialized = False
self._pixelLock = threading.Lock() # semaphore for VLC pixel transfer
self._framePixelBuffer = None # buffer pointer to draw to
self._videoFrameBufferSize = None
self._streamEnded = False
# spawn a VLC instance for this class instance
# self._createVLCInstance()
# load a movie if provided
if self._filename:
self.loadMovie(self._filename)
self.setVolume(volume)
self.nDroppedFrames = 0
self._autoStart = autoStart
self.ori = ori
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created {} = {}".format(self.name, self))
def __init__(self,
win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
vframe_callback=None,
fps=None,
interpolate=True):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 100, and 0 is silence.
loop : bool, optional
Whether to start the movie over from the beginning if draw is
called and the movie is done.
"""
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(VlcMovieStim, self).__init__(win,
units=units,
name=name,
autoLog=False)
# check for pyglet
if win.winType != 'pyglet':
logging.error(
'Movie stimuli can only be used with a pyglet window')
core.quit()
self._retracerate = win._monitorFrameRate
if self._retracerate is None:
self._retracerate = win.getActualFrameRate()
if self._retracerate is None:
logging.warning("FrameRate could not be supplied by psychopy; "
"defaulting to 60.0")
self._retracerate = 60.0
self.filename = pathToString(filename)
self.loop = loop
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
self.size = numpy.asarray(size, float)
self.depth = depth
self.opacity = float(opacity)
self.volume = volume
self.no_audio = noAudio
self.interpolate = interpolate
self._texture_id = GL.GLuint()
GL.glGenTextures(1, ctypes.byref(self._texture_id))
self._pause_time = 0
self._vlc_clock = Clock()
self._vlc_initialized = False
self._reset()
self.loadMovie(self.filename)
self.setVolume(volume)
self.nDroppedFrames = 0
self.ori = ori
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created {} = {}".format(self.name, self))
def __init__(self, win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
vframe_callback=None,
fps=None,
interpolate=True):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 100, and 0 is silence.
loop : bool, optional
Whether to start the movie over from the beginning if draw is
called and the movie is done.
"""
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim3, self).__init__(win, units=units, name=name,
autoLog=False)
retraceRate = win._monitorFrameRate
if retraceRate is None:
retraceRate = win.getActualFrameRate()
if retraceRate is None:
logging.warning("FrameRate could not be supplied by psychopy; "
"defaulting to 60.0")
retraceRate = 60.0
self._retraceInterval = 1.0/retraceRate
self.filename = pathToString(filename)
self.loop = loop
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
self.depth = depth
self.opacity = float(opacity)
self.interpolate = interpolate
self.noAudio = noAudio
self._audioStream = None
self.useTexSubImage2D = True
if noAudio: # to avoid dependency problems in silent movies
self.sound = None
else:
from psychopy import sound
self.sound = sound
self._videoClock = Clock()
self.loadMovie(self.filename)
self.setVolume(volume)
self.nDroppedFrames = 0
# size
if size is None:
self.size = numpy.array([self._mov.w, self._mov.h],
float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created %s = %s" % (self.name, str(self)))
def saveAsExcel(self,
fileName,
sheetName='rawData',
stimOut=None,
dataOut=('n', 'all_mean', 'all_std', 'all_raw'),
matrixOnly=False,
appendFile=True,
fileCollisionMethod='rename'):
"""
Save a summary data file in Excel OpenXML format workbook
(:term:`xlsx`) for processing in most spreadsheet packages.
This format is compatible with versions of Excel (2007 or greater)
and and with OpenOffice (>=3.0).
It has the advantage over the simpler text files (see
:func:`TrialHandler.saveAsText()` )
that data can be stored in multiple named sheets within the file.
So you could have a single file named after your experiment and
then have one worksheet for each participant. Or you could have
one file for each participant and then multiple sheets for
repeated sessions etc.
The file extension `.xlsx` will be added if not given already.
:Parameters:
fileName: string
the name of the file to create or append. Can include
relative or absolute path
sheetName: string
the name of the worksheet within the file
stimOut: list of strings
the attributes of the trial characteristics to be output.
To use this you need to have provided a list of dictionaries
specifying to trialList parameter of the TrialHandler and
give here the names of strings specifying entries in that
dictionary
dataOut: list of strings
specifying the dataType and the analysis to
be performed, in the form `dataType_analysis`. The data
can be any of the types that you added using
trialHandler.data.add() and the analysis can be either
'raw' or most things in the numpy library, including
'mean','std','median','max','min'. e.g. `rt_max` will give
a column of max reaction times across the trials assuming
that `rt` values have been stored. The default values will
output the raw, mean and std of all datatypes found.
appendFile: True or False
If False any existing file with this name will be
overwritten. If True then a new worksheet will be appended.
If a worksheet already exists with that name a number will
be added to make it unique.
fileCollisionMethod: string
Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`
This is ignored if ``append`` is ``True``.
"""
fileName = pathToString(fileName)
if stimOut is None:
stimOut = []
if self.thisTrialN < 1 and self.thisRepN < 1:
# if both are < 1 we haven't started
if self.autoLog:
logging.info('TrialHandler.saveAsExcel called but no '
'trials completed. Nothing saved')
return -1
# NB this was based on the limited documentation (1 page wiki) for
# openpyxl v1.0
if not haveOpenpyxl:
raise ImportError('openpyxl is required for saving files in'
' Excel (xlsx) format, but was not found.')
# return -1
# create the data array to be sent to the Excel file
dataArray = self._createOutputArray(stimOut=stimOut,
dataOut=dataOut,
matrixOnly=matrixOnly)
if not fileName.endswith('.xlsx'):
fileName += '.xlsx'
# create or load the file
if appendFile and os.path.isfile(fileName):
wb = load_workbook(fileName)
newWorkbook = False
else:
if not appendFile:
# the file exists but we're not appending, will be overwritten
fileName = handleFileCollision(fileName, fileCollisionMethod)
wb = Workbook() # create new workbook
wb.properties.creator = 'PsychoPy' + psychopy.__version__
newWorkbook = True
if newWorkbook:
ws = wb.worksheets[0]
ws.title = sheetName
else:
ws = wb.create_sheet()
ws.title = sheetName
# loop through lines in the data matrix
for lineN, line in enumerate(dataArray):
if line is None:
continue
for colN, entry in enumerate(line):
if entry is None:
entry = ''
try:
# if it can convert to a number (from numpy) then do it
val = float(entry)
except Exception:
val = u"{}".format(entry)
ws.cell(column=colN + 1, row=lineN + 1, value=val)
wb.save(filename=fileName)
def setSound(self, value, secs=0.5, octave=4, hamming=True, log=True):
"""Set the sound to be played.
Often this is not needed by the user - it is called implicitly during
initialisation.
Parameters
----------
value : ArrayLike, int or str
If it's a number between 37 and 32767 then a tone will be generated
at that frequency in Hz. It could be a string for a note ('A',
'Bfl', 'B', 'C', 'Csh'. ...). Then you may want to specify which
octave.O r a string could represent a filename in the current
location, or media location, or a full path combo. Or by giving an
Nx2 numpy array of floats (-1:1).
secs : float
Duration of a tone if a note name is to `value`.
octave : int
Is only relevant if the value is a note name. Middle octave of a
piano is 4. Most computers won't output sounds in the bottom octave
(1) and the top octave (8) is generally painful.
hamming : bool
To indicate if the sound should be apodized (i.e., the onset and
offset smoothly ramped up from down to zero). The function apodize
uses a Hanning window, but arguments named 'hamming' are preserved
so that existing code is not broken by the change from Hamming to
Hanning internally. Not applied to sounds from files.
"""
# Re-init sound to ensure bad values will raise error during setting:
self._snd = None
# Coerces pathlib obj to string, else returns inputted value
value = pathToString(value)
try:
# could be '440' meaning 440
value = float(value)
except (ValueError, TypeError):
# this is a string that can't be a number, eg, a file or note
pass
else:
# we've been asked for a particular Hz
if value < 37 or value > 20000:
msg = 'Sound: bad requested frequency %.0f'
raise ValueError(msg % value)
self._setSndFromFreq(value, secs, hamming=hamming)
if isinstance(value, basestring):
if value.capitalize() in knownNoteNames:
self._setSndFromNote(value.capitalize(),
secs,
octave,
hamming=hamming)
else:
# try finding a file
self.fileName = None
for filePath in ['', mediaLocation]:
p = path.join(filePath, value)
if path.isfile(p):
self.fileName = p
break
elif path.isfile(p + '.wav'):
self.fileName = p = p + '.wav'
break
if self.fileName is None:
msg = "setSound: could not find a sound file named "
raise ValueError(msg + value)
else:
self._setSndFromFile(p)
elif type(value) in [list, numpy.ndarray]:
# create a sound from the input array/list
self._setSndFromArray(numpy.array(value))
# did we succeed?
if self._snd is None:
pass # raise ValueError, "Could not make a "+value+" sound"
else:
if log and self.autoLog:
logging.exp("Set %s sound=%s" % (self.name, value), obj=self)
self.status = NOT_STARTED
def __init__(self,
win,
filename="",
units='pix',
size=None,
pos=(0.0, 0.0),
ori=0.0,
flipVert=False,
flipHoriz=False,
color=(1.0, 1.0, 1.0),
colorSpace='rgb',
opacity=1.0,
volume=1.0,
name='',
loop=False,
autoLog=True,
depth=0.0,
noAudio=False,
vframe_callback=None,
fps=None,
interpolate=True):
"""
:Parameters:
filename :
a string giving the relative or absolute path to the movie.
flipVert : True or *False*
If True then the movie will be top-bottom flipped
flipHoriz : True or *False*
If True then the movie will be right-left flipped
volume :
The nominal level is 100, and 0 is silence.
loop : bool, optional
Whether to start the movie over from the beginning if draw is
called and the movie is done.
"""
# what local vars are defined (these are the init params) for use
# by __repr__
self._initParams = dir()
self._initParams.remove('self')
super(MovieStim3, self).__init__(win,
units=units,
name=name,
autoLog=False)
retraceRate = win._monitorFrameRate
if retraceRate is None:
retraceRate = win.getActualFrameRate()
if retraceRate is None:
logging.warning("FrameRate could not be supplied by psychopy; "
"defaulting to 60.0")
retraceRate = 60.0
self._retraceInterval = 1.0 / retraceRate
self.filename = pathToString(filename)
self.loop = loop
self.flipVert = flipVert
self.flipHoriz = flipHoriz
self.pos = numpy.asarray(pos, float)
self.depth = depth
self.opacity = float(opacity)
self.interpolate = interpolate
self.noAudio = noAudio
self._audioStream = None
self.useTexSubImage2D = True
if noAudio: # to avoid dependency problems in silent movies
self.sound = None
else:
from psychopy import sound
self.sound = sound
# set autoLog (now that params have been initialised)
self.autoLog = autoLog
if autoLog:
logging.exp("Created %s = %s" % (self.name, str(self)))
self._videoClock = Clock()
self.loadMovie(self.filename)
self.setVolume(volume)
self.nDroppedFrames = 0
# size
if size is None:
self.size = numpy.array([self._mov.w, self._mov.h], float)
else:
self.size = val2array(size)
self.ori = ori
self._updateVertices()
def setImage(self, filename=None, log=None):
"""Usually you can use 'stim.attribute = value' syntax instead,
but use this method if you need to suppress the log message.
"""
filename = pathToString(filename)
setAttribute(self, 'image', filename, log)
def saveAsText(self,
fileName,
stimOut=None,
dataOut=('n', 'all_mean', 'all_std', 'all_raw'),
delim=None,
matrixOnly=False,
appendFile=True,
summarised=True,
fileCollisionMethod='rename',
encoding='utf-8'):
"""
Write a text file with the data and various chosen stimulus attributes
:Parameters:
fileName:
will have .tsv appended and can include path info.
stimOut:
the stimulus attributes to be output. To use this you need to
use a list of dictionaries and give here the names of dictionary
keys that you want as strings
dataOut:
a list of strings specifying the dataType and the analysis to
be performed,in the form `dataType_analysis`. The data can be
any of the types that you added using trialHandler.data.add()
and the analysis can be either 'raw' or most things in the
numpy library, including; 'mean','std','median','max','min'...
The default values will output the raw, mean and std of all
datatypes found
delim:
allows the user to use a delimiter other than tab
("," is popular with file extension ".csv")
matrixOnly:
outputs the data with no header row or extraInfo attached
appendFile:
will add this output to the end of the specified file if
it already exists
fileCollisionMethod:
Collision method passed to
:func:`~psychopy.tools.fileerrortools.handleFileCollision`
encoding:
The encoding to use when saving a the file. Defaults to `utf-8`.
"""
fileName = pathToString(fileName)
if stimOut is None:
stimOut = []
if self.thisTrialN < 1 and self.thisRepN < 1:
# if both are < 1 we haven't started
if self.autoLog:
logging.info('TrialHandler.saveAsText called but no trials'
' completed. Nothing saved')
return -1
dataArray = self._createOutputArray(stimOut=stimOut,
dataOut=dataOut,
matrixOnly=matrixOnly)
# set default delimiter if none given
if delim is None:
delim = genDelimiter(fileName)
# create the file or send to stdout
fileName = genFilenameFromDelimiter(fileName, delim)
with openOutputFile(fileName=fileName,
append=appendFile,
fileCollisionMethod=fileCollisionMethod,
encoding=encoding) as f:
# loop through lines in the data matrix
for line in dataArray:
for cellN, entry in enumerate(line):
# surround in quotes to prevent effect of delimiter
if delim in str(entry):
f.write(u'"%s"' % str(entry))
else:
f.write(str(entry))
if cellN < (len(line) - 1):
f.write(delim)
f.write("\n") # add an EOL at end of each line
if (fileName is not None) and (fileName != 'stdout') and self.autoLog:
logging.info('saved data to %s' % f.name)