def setUp(self):
with open('test_db_dump.xml') as handle:
self.xml_string = handle.read()
self.parse_xml_to_fail = ParseXML(xml_string=self.xml_string,
tables_prefix='voseq_',
verbosity=0)
self.parse_xml = ParseXML(xml_string=self.xml_string,
tables_prefix='',
verbosity=0)
def setUp(self):
file_name = settings.MEDIA_ROOT + 'test_db_dump.xml'
with open(file_name) as handle:
self.xml_string = handle.read()
self.parse_xml_to_fail = ParseXML(xml_string=self.xml_string,
tables_prefix='voseq_',
verbosity=0)
self.parse_xml = ParseXML(xml_string=self.xml_string,
tables_prefix='',
verbosity=0)
class TestParseXML(TestCase):
def setUp(self):
file_name = settings.MEDIA_ROOT + 'test_db_dump.xml'
with open(file_name) as handle:
self.xml_string = handle.read()
self.parse_xml_to_fail = ParseXML(xml_string=self.xml_string,
tables_prefix='voseq_',
verbosity=0)
self.parse_xml = ParseXML(xml_string=self.xml_string,
tables_prefix='',
verbosity=0)
def test_parse_table_genes(self):
"""We don't have tables with prefix 'voseq_' in our test_db_dump.xml file
"""
self.assertRaises(ValueError, self.parse_xml_to_fail.parse_table_genes,
self.xml_string)
def test_parse_timestamp_good(self):
"""Make some sense of the multiple datetimes and timestamps that we have
in the MySQL databases.
"""
TZINFO = pytz.utc
timestamp = '2014-10-01 10:20:45'
expected = datetime.datetime(2014, 10, 1, 10, 20, 45, tzinfo=TZINFO)
result = self.parse_xml.parse_timestamp(timestamp, 'good')
self.assertEqual(expected, result)
def test_parse_timestamp_bad(self):
timestamp = '0000-00-00 00:00:00'
expected = None
result = self.parse_xml.parse_timestamp(timestamp, 'bad')
self.assertEqual(expected, result)
def test_parse_timestamp_null(self):
timestamp = None
expected = None
result = self.parse_xml.parse_timestamp(timestamp, 'null')
self.assertEqual(expected, result)
def test_parse_timestamp_null_verbose(self):
timestamp = None
expected = None
self.parse_xml.verbosity = 1
result = self.parse_xml.parse_timestamp(timestamp, 'null_verbose')
self.assertEqual(expected, result)
def setUp(self):
with open('test_db_dump.xml') as handle:
self.xml_string = handle.read()
self.parse_xml_to_fail = ParseXML(xml_string=self.xml_string, tables_prefix='voseq_',
verbosity=0)
self.parse_xml = ParseXML(xml_string=self.xml_string, tables_prefix='',
verbosity=0)
class TestParseXML(TestCase):
def setUp(self):
with open('test_db_dump.xml') as handle:
self.xml_string = handle.read()
self.parse_xml_to_fail = ParseXML(xml_string=self.xml_string, tables_prefix='voseq_',
verbosity=0)
self.parse_xml = ParseXML(xml_string=self.xml_string, tables_prefix='',
verbosity=0)
def test_parse_table_genes(self):
"""We don't have tables with prefix 'voseq_' in our test_db_dump.xml file
"""
self.assertRaises(ValueError, self.parse_xml_to_fail.parse_table_genes, self.xml_string)
def test_parse_timestamp_good(self):
"""Make some sense of the multiple datetimes and timestamps that we have
in the MySQL databases.
"""
TZINFO = pytz.utc
timestamp = '2014-10-01 10:20:45'
expected = datetime.datetime(2014, 10, 1, 10, 20, 45, tzinfo=TZINFO)
result = self.parse_xml.parse_timestamp(timestamp, 'good')
self.assertEqual(expected, result)
def test_parse_timestamp_bad(self):
timestamp = '0000-00-00 00:00:00'
expected = None
result = self.parse_xml.parse_timestamp(timestamp, 'bad')
self.assertEqual(expected, result)
def test_parse_timestamp_null(self):
timestamp = None
expected = None
result = self.parse_xml.parse_timestamp(timestamp, 'null')
self.assertEqual(expected, result)
def test_parse_timestamp_null_verbose(self):
timestamp = None
expected = None
self.parse_xml.verbosity = 1
result = self.parse_xml.parse_timestamp(timestamp, 'null_verbose')
self.assertEqual(expected, result)
