def __init__(self,
ip="192.168.5.19",
fps=30,
poni=None,
json=None,
writer=None,
cake=None):
QtGui.QWidget.__init__(self)
try:
uic.loadUi(UIC, self)
except AttributeError as error:
logger.error(
"I looks like your installation suffers from this bug: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=697348"
)
raise RuntimeError(
"Please upgrade your installation of PyQt (or apply the patch)"
)
self.ip = str(ip)
self.fps = float(fps)
self.label_ip.setText(str(ip))
self.label_fps.setText(str(fps))
self.cam = self.iface = self.ctrl = self.acq = None
self.cam = Basler.Camera(self.ip)
self.iface = Basler.Interface(self.cam)
self.ctrl = Core.CtControl(self.iface)
self.is_playing = False
self.cake = int(cake)
self.connect(self.pushButton_play, SIGNAL("clicked()"), self.start_acq)
self.connect(self.pushButton_stop, SIGNAL("clicked()"), self.stop_acq)
self.last_frame = None
self.last = time.time()
if poni:
worker = pyFAI.worker.Worker(ai=pyFAI.load(poni))
elif json:
worker = pyFAI.worker.Worker()
worker.setJsonConfig(json)
else:
worker = None
self.processLink = LinkPyFAI(worker, writer)
self.extMgr = self.ctrl.externalOperation()
self.myOp = self.extMgr.addOp(Core.USER_LINK_TASK, "pyFAILink", 0)
self.myOp.setLinkTask(self.processLink)
self.callback = StartAcqCallback(self.ctrl, self.processLink)
self.myOp.registerCallback(self.callback)
self.timer = QtCore.QTimer()
self.connect(self.timer, SIGNAL("timeout()"), self.update_img)
self.writer = writer
self.dLayout = QtGui.QHBoxLayout(self.frame)
if self.cake <= 1:
self.variablePlot = pg.PlotWidget(parent=self.frame)
else:
self.variablePlot = pg.ImageView(parent=self.frame)
self.dLayout.addWidget(self.variablePlot)
def __init__(self, ip="192.168.5.19", fps=30, poni=None, json=None, writer=None, cake=None):
QtGui.QWidget.__init__(self)
try:
uic.loadUi(UIC, self)
except AttributeError as error:
logger.error("I looks like your installation suffers from this bug: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=697348")
raise RuntimeError("Please upgrade your installation of PyQt (or apply the patch)")
self.ip = str(ip)
self.fps = float(fps)
self.label_ip.setText(str(ip))
self.label_fps.setText(str(fps))
self.cam = self.iface = self.ctrl = self.acq = None
self.cam = Basler.Camera(self.ip)
self.iface = Basler.Interface(self.cam)
self.ctrl = Core.CtControl(self.iface)
self.is_playing = False
self.cake = int(cake)
self.connect(self.pushButton_play, SIGNAL("clicked()"), self.start_acq)
self.connect(self.pushButton_stop, SIGNAL("clicked()"), self.stop_acq)
self.last_frame = None
self.last = time.time()
if poni:
worker = pyFAI.worker.Worker(azimuthalIntegrator=pyFAI.load(poni))
elif json:
worker = pyFAI.worker.Worker()
worker.setJsonConfig(json)
else:
worker = None
self.processLink = LinkPyFAI(worker, writer)
self.extMgr = self.ctrl.externalOperation()
self.myOp = self.extMgr.addOp(Core.USER_LINK_TASK, "pyFAILink", 0)
self.myOp.setLinkTask(self.processLink)
self.callback = StartAcqCallback(self.ctrl, self.processLink)
self.myOp.registerCallback(self.callback)
self.timer = QtCore.QTimer()
self.connect(self.timer, SIGNAL("timeout()"), self.update_img)
self.writer = writer
self.dLayout = QtGui.QHBoxLayout(self.frame)
if self.cake <= 1:
self.variablePlot = pg.PlotWidget(parent=self.frame)
else:
self.variablePlot = pg.ImageView(parent=self.frame)
self.dLayout.addWidget(self.variablePlot)
def integrate_shell(options, args):
import json
config = json.load(open(options.json))
ai = pyFAI.worker.make_ai(config)
worker = pyFAI.worker.Worker(azimuthalIntegrator=ai)
# TODO this will init again the azimuthal integrator, there is a problem on the architecture
worker.setJsonConfig(options.json)
worker.safe = False # all processing are expected to be the same.
start_time = time.time()
# Skip unexisting files
image_filenames = []
for item in args:
if os.path.exists(item) and os.path.isfile(item):
image_filenames.append(item)
else:
logger.warning("File %s do not exists. Ignored." % item)
image_filenames = sorted(image_filenames)
progress_bar = ProgressBar("Integration", len(image_filenames), 20)
# Integrate files one by one
for i, item in enumerate(image_filenames):
logger.debug("Processing %s" % item)
if len(item) > 100:
message = os.path.basename(item)
else:
message = item
progress_bar.update(i + 1, message=message)
img = fabio.open(item)
multiframe = img.nframes > 1
custom_ext = True
if options.output:
if os.path.isdir(options.output):
outpath = os.path.join(options.output, os.path.splitext(os.path.basename(item))[0])
else:
outpath = os.path.abspath(options.output)
custom_ext = False
else:
outpath = os.path.splitext(item)[0]
if custom_ext:
if multiframe:
outpath = outpath + "_pyFAI.h5"
else:
if worker.do_2D():
outpath = outpath + ".azim"
else:
outpath = outpath + ".dat"
if multiframe:
writer = HDF5Writer(outpath)
writer.init(config)
for i in range(img.nframes):
fimg = img.getframe(i)
normalization_factor = get_monitor_value(fimg, options.monitor_key)
data = img.data
res = worker.process(data=data,
metadata=fimg.header,
normalization_factor=normalization_factor)
if not worker.do_2D():
res = res.T[1]
writer.write(res, index=i)
writer.close()
else:
normalization_factor = get_monitor_value(img, options.monitor_key)
data = img.data
writer = DefaultAiWriter(outpath, worker.ai)
worker.process(data,
normalization_factor=normalization_factor,
writer=writer)
writer.close()
progress_bar.clear()
logger.info("Processing done in %.3fs !" % (time.time() - start_time))
def integrate_shell(options, args):
import json
with open(options.json) as f:
config = json.load(f)
ai = pyFAI.worker.make_ai(config)
worker = pyFAI.worker.Worker(azimuthalIntegrator=ai)
# TODO this will init again the azimuthal integrator, there is a problem on the architecture
worker.setJsonConfig(options.json)
worker.safe = False # all processing are expected to be the same.
start_time = time.time()
# Skip unexisting files
image_filenames = []
for item in args:
if os.path.exists(item) and os.path.isfile(item):
image_filenames.append(item)
else:
logger.warning("File %s do not exists. Ignored.", item)
image_filenames = sorted(image_filenames)
progress_bar = ProgressBar("Integration", len(image_filenames), 20)
# Integrate files one by one
for i, item in enumerate(image_filenames):
logger.debug("Processing %s", item)
if len(item) > 100:
message = os.path.basename(item)
else:
message = item
progress_bar.update(i + 1, message=message)
img = fabio.open(item)
multiframe = img.nframes > 1
custom_ext = True
if options.output:
if os.path.isdir(options.output):
outpath = os.path.join(
options.output,
os.path.splitext(os.path.basename(item))[0])
else:
outpath = os.path.abspath(options.output)
custom_ext = False
else:
outpath = os.path.splitext(item)[0]
if custom_ext:
if multiframe:
outpath = outpath + "_pyFAI.h5"
else:
if worker.do_2D():
outpath = outpath + ".azim"
else:
outpath = outpath + ".dat"
if multiframe:
writer = HDF5Writer(outpath)
writer.init(config)
for i in range(img.nframes):
fimg = img.getframe(i)
normalization_factor = get_monitor_value(
fimg, options.monitor_key)
data = img.data
res = worker.process(data=data,
metadata=fimg.header,
normalization_factor=normalization_factor)
if not worker.do_2D():
res = res.T[1]
writer.write(res, index=i)
writer.close()
else:
normalization_factor = get_monitor_value(img, options.monitor_key)
data = img.data
writer = DefaultAiWriter(outpath, worker.ai)
worker.process(data,
normalization_factor=normalization_factor,
writer=writer)
writer.close()
progress_bar.clear()
logger.info("Processing done in %.3fs !", (time.time() - start_time))
return 0