def bin_dh_zsc_by_season(dh, zsc, date):
season_month_bins = np.arange(1, 13, 1)
mon = pd.DatetimeIndex(date).month.values
med_dh = []
nmad_dh = []
med_zsc = []
nmad_zsc = []
mid_bin = []
for i in range(len(season_month_bins)):
ind = (mon == season_month_bins[i])
if np.count_nonzero(ind) > 0:
# ind = np.logical_and(mon >= season_month_bins[i], mon < season_month_bins[i + 1])
med_dh.append(np.nanmedian(dh[ind]))
nmad_dh.append(nmad(dh[ind]))
med_zsc.append(np.nanmedian(zsc[ind]))
nmad_zsc.append(nmad(zsc[ind]))
mid_bin.append(season_month_bins[i])
return [
np.array(mid_bin),
np.array(med_dh),
np.array(nmad_dh),
np.array(med_zsc),
np.array(nmad_zsc)
]
def bin_valid_df_by_season(df,var='dh',weight_ib=1./40):
date=df.t
season_month_bins = np.arange(1,13,1)
mon = pd.DatetimeIndex(date).month.values
med, std, mid_bin, ns_ics, ns_ib = ([] for i in range(5))
for i in range(len(season_month_bins)):
ind = (mon == season_month_bins[i])
df_ind = df[ind]
nics = np.count_nonzero(df_ind.sensor == 'ICS')
nib = np.count_nonzero(df_ind.sensor == 'IB')
ns_ics.append(nics)
ns_ib.append(nib)
# med.append(np.nanmedian(df_ind[var].values))
# std.append(nmad(df_ind[var].values))
if nics != 0 or nib != 0:
med.append(np.nansum((np.nanmedian(df_ind[df_ind.sensor == 'ICS'][var]) * nics,
np.nanmedian(df_ind[df_ind.sensor == 'IB'][var]) * nib * weight_ib)) / (nics + nib * weight_ib))
std.append(np.nansum((nmad(df_ind[df_ind.sensor == 'ICS'][var]) * nics,
nmad(df_ind[df_ind.sensor == 'IB'][var]) * nib * weight_ib)) / (
nics + nib * weight_ib))
else:
med.append(np.nan)
std.append(np.nan)
mid_bin.append(season_month_bins[i])
df_out = pd.DataFrame()
df_out = df_out.assign(seas_dec=mid_bin,ns_ics=ns_ics,ns_ib=ns_ib)
df_out['med_'+var]=med
df_out['nmad_'+var]=std
return df_out
def bin_dh_zsc_by_vals(dh, zsc, bins, bins_val):
med_dh = []
nmad_dh = []
med_zsc = []
nmad_zsc = []
mid_bin = []
for i in range(len(bins) - 1):
ind = np.logical_and(bins_val >= bins[i], bins_val < bins[i + 1])
if len(ind) > 100:
med_dh.append(np.nanmedian(dh[ind]))
nmad_dh.append(nmad(dh[ind]))
# nmad_dh.append(np.nanstd(dh[ind]))
med_zsc.append(np.nanmedian(zsc[ind]))
nmad_zsc.append(nmad(zsc[ind]))
# nmad_zsc.append(np.nanstd(zsc[ind]))
mid_bin.append(bins[i] + 0.5 * (bins[i + 1] - bins[i]))
return [
np.array(mid_bin),
np.array(med_dh),
np.array(nmad_dh),
np.array(med_zsc),
np.array(nmad_zsc)
]
def bin_valid_df_by_vals(df,
bins,
bins_val,
list_var=['dh', 'zsc'],
ls_dvardt=True,
weight_ib=1. / 40,
return_ls=False):
mid_bin, med, std, dvardt, dvardt_2std, ns_ics, ns_ib = ([]
for i in range(7))
for i in range(len(bins) - 1):
ind = np.logical_and(bins_val >= bins[i], bins_val < bins[i + 1])
df_ind = df[ind]
nics = np.count_nonzero(df_ind.sensor == 'ICS')
nib = np.count_nonzero(df_ind.sensor == 'IB')
ns_ics.append(nics)
ns_ib.append(nib)
mid_bin.append(bins[i] + 0.5 * (bins[i + 1] - bins[i]))
sub_med = []
sub_std = []
sub_dvardt = []
sub_dvardt_2std = []
sub_mu = []
sub_w = []
sub_t = []
for var in list_var:
if weight_ib is not None:
if nics != 0 or nib != 0:
sub_med.append(
np.nansum(
(np.nanmedian(
df_ind[df_ind.sensor == 'ICS'][var]) * nics,
np.nanmedian(df_ind[df_ind.sensor == 'IB'][var]) *
nib * weight_ib)) / (nics + nib * weight_ib))
sub_std.append(
np.nansum(
(nmad(df_ind[df_ind.sensor == 'ICS'][var]) * nics,
nmad(df_ind[df_ind.sensor == 'IB'][var]) * nib *
weight_ib)) / (nics + nib * weight_ib))
else:
sub_med.append(np.nan)
sub_std.append(np.nan)
else:
sub_med.append(np.nanmedian(df_ind[var]))
sub_std.append(nmad(df_ind[var].values))
if ls_dvardt:
list_t = sorted(list(set(list(df_ind.t.values))))
ftime_delta = np.array([
(np.datetime64(t) -
np.datetime64('{}-01-01'.format(int(2000)))).astype(int) /
365.2422 for t in list_t
])
mu = []
w = []
for val_t in list_t:
ind_t = df_ind.t.values == val_t
df_ind_t = df_ind[ind_t]
nics_t = np.count_nonzero(df_ind_t.sensor == 'ICS')
nib_t = np.count_nonzero(df_ind_t.sensor == 'IB')
if np.count_nonzero(ind_t) > 20:
med_t = np.nansum(
(np.nanmedian(
df_ind_t[df_ind_t.sensor == 'ICS'][var]) *
nics_t,
np.nanmedian(
df_ind_t[df_ind_t.sensor == 'IB'][var]) *
nib_t * weight_ib)) / (nics_t + nib_t * weight_ib)
mu.append(med_t)
std_t = np.nansum(
(nmad(df_ind_t[df_ind_t.sensor == 'ICS'][var]) *
nics_t,
nmad(df_ind_t[df_ind_t.sensor == 'IB'][var]) *
nib_t * weight_ib)) / (nics_t + nib_t * weight_ib)
w.append(std_t / np.sqrt(nics_t + nib_t * weight_ib))
else:
mu.append(np.nan)
w.append(np.nan)
mu = np.array(mu)
w = np.array(w)
if np.count_nonzero(~np.isnan(mu)) > 5:
# reg = LinearRegression().fit(ftime_delta[~np.isnan(mu)].reshape(-1, 1),
# mu[~np.isnan(mu)].reshape(-1, 1))
beta1, _, incert_slope, _, _ = ft.wls_matrix(
ftime_delta[~np.isnan(mu)],
mu[~np.isnan(mu)],
1. / w[~np.isnan(mu)]**2,
conf_slope=0.95)
# fig = plt.figure()
# plt.scatter(ftime_delta,mu_dh,color='red')
# plt.plot(np.arange(0,10,0.1),reg.predict(np.arange(0,10,0.1).reshape(-1,1)),color='black',label=reg)
# plt.ylim([-20,20])
# plt.text(5,0,str(reg.coef_[0]))
# plt.legend()
# coef = reg.coef_[0][0]
coef = beta1
sub_dvardt.append(coef)
sub_dvardt_2std.append(incert_slope)
else:
sub_dvardt.append(np.nan)
sub_dvardt_2std.append(np.nan)
sub_mu.append(mu)
sub_w.append(w)
sub_t.append(ftime_delta)
med.append(sub_med)
std.append(sub_std)
dvardt.append(sub_dvardt)
dvardt_2std.append(sub_dvardt_2std)
df_out = pd.DataFrame()
df_out = df_out.assign(mid_bin=mid_bin, ns_ics=ns_ics, ns_ib=ns_ib)
for var in list_var:
df_out['med_' + var] = list(zip(*med))[list_var.index(var)]
df_out['nmad_' + var] = list(zip(*std))[list_var.index(var)]
if ls_dvardt:
df_out['d' + var + '_dt'] = list(zip(*dvardt))[list_var.index(var)]
df_out['d' + var + '_dt_2std'] = list(
zip(*dvardt_2std))[list_var.index(var)]
if return_ls and ls_dvardt:
df_ls = pd.DataFrame()
for var in list_var:
# print(len(sub_mu))
df_ls['mu_' + var] = sub_mu[list_var.index(var)]
df_ls['w_' + var] = sub_w[list_var.index(var)]
df_ls['t_' + var] = sub_t[list_var.index(var)]
return df_out, df_ls
else:
return df_out
df_out = pd.DataFrame()
df_out = df_out.assign(mid_bin=mid_bin, ns_ics=ns_ics, ns_ib=ns_ib)
df_out['med_' + var] = med
df_out['nmad_' + var] = std
return df_out
fig = plt.figure(figsize=(9, 12))
plt.subplots_adjust(hspace=0.3)
ax = fig.add_subplot(3, 1, 1)
df = df_tot[df_tot.sensor == 'ICS']
nmad_gla = nmad(df[df.pos == 2].zsc)
nmad_stable = nmad(df[df.pos == 1].zsc)
ax.text(0.025,
0.965,
'a',
transform=ax.transAxes,
fontsize=14,
fontweight='bold',
va='top',
ha='left')
ax.hist(df[df.pos == 1].zsc,
np.arange(-5, 5, 0.1),
label='Stable',
alpha=0.5,
color='tab:red')
for reg in list(set(list(df.reg))):
df_reg = df[df.reg == reg]
t0_n = bin_dh_zsc_by_season(df_reg.dh, df_reg.dh_ref, df_reg.t)
coefs1, _ = scipy.optimize.curve_fit(
lambda t, a, b, c: a**2 * np.sin(t * 2 * np.pi / 12 + c) + b,
t0_n[0][:-1], t0_n[3][:-1])
season_month_bins = np.arange(1, 13, 1)
mon = pd.DatetimeIndex(df.t).month.values
for i in range(len(season_month_bins)):
ind = np.logical_and(mon == season_month_bins[i], df.reg == reg)
df.dh[ind] -= coefs1[0]**2 * np.sin(season_month_bins[i] * 2 * np.pi /
12 + coefs1[2]) + coefs1[1]
sl_s = bin_dh_zsc_by_vals(df.zsc, df.dh, np.arange(0, 60, 5), df.slp)
nmad_zsc = nmad(df.zsc)
# nmad_dh = nmad(df.dh)
df_corr = df.copy()
vec_slope = np.arange(0, 60, 5)
for i in np.arange(len(vec_slope) - 1):
ind = np.logical_and(df_corr.slp >= vec_slope[i],
df_corr.slp < vec_slope[i + 1])
df_corr[ind].zsc = df_corr[ind].zsc / sl_s[2][i]
# df_corr.dh[ind] = df_corr.dh[ind]/sl_s[4][i] * nmad_dh
df = df[np.abs(df_corr.zsc) < 3 * nmad_zsc]
nmad_dh = nmad(df.dh)
df = df[np.abs(df.dh) < 3 * nmad_dh]
nproc = 64
def ddem_hypso(ddem,
dem,
mask,
gsd,
bin_type='fixed',
bin_val=100.,
filt='5NMAD'):
final_mask = np.logical_and(
np.logical_and(np.isfinite(ddem), np.isfinite(dem)), mask)
std_stable = nmad(ddem[~mask])
area_tot = np.count_nonzero(mask) * gsd**2
if np.count_nonzero(final_mask) == 0:
return np.nan, np.nan, 0, area_tot
dem_on_mask = dem[final_mask]
ddem_on_mask = ddem[final_mask]
min_elev = np.min(dem_on_mask) - (np.min(dem_on_mask) % bin_val)
max_elev = np.max(dem_on_mask) + 1
if bin_type == 'fixed':
bin_final = bin_val
elif bin_type == 'percentage':
bin_final = np.ceil(bin_val / 100. * (max_elev - min_elev))
else:
sys.exit('Bin type not recognized.')
bins_on_mask = np.arange(min_elev, max_elev, bin_final)
nb_bin = len(bins_on_mask)
elev_bin, nmad_bin, med_bin, mean_bin, std_bin, area_tot_bin, area_meas_bin = (
np.zeros(nb_bin) * np.nan for i in range(7))
for i in np.arange(nb_bin):
idx_bin = np.array(dem_on_mask >= bins_on_mask[i]) & np.array(
dem_on_mask < (bins_on_mask[i] + bin_final))
idx_orig = np.array(dem >= bins_on_mask[i]) & np.array(
dem < (bins_on_mask[i] + bin_final)) & mask
area_tot_bin[i] = np.count_nonzero(idx_orig) * gsd**2
area_meas_bin[i] = np.count_nonzero(idx_bin) * gsd**2
elev_bin[i] = bins_on_mask[i] + bin_final / 2.
dh_bin = ddem_on_mask[idx_bin]
nvalid = len(dh_bin[~np.isnan(dh_bin)])
if nvalid > 0:
std_bin[i] = np.nanstd(dh_bin)
med_bin[i] = np.nanmedian(dh_bin)
if filt and nvalid > 10:
median_temp = np.nanmedian(dh_bin)
MAD_temp = np.nanmedian(np.absolute(dh_bin - median_temp))
NMAD_temp = 1.4826 * MAD_temp
nmad_bin[i] = NMAD_temp
dh_bin[np.absolute(dh_bin - median_temp) > 5 *
NMAD_temp] = np.nan
mean_bin[i] = np.nanmean(dh_bin)
area_meas = np.nansum(area_meas_bin)
perc_area_meas = area_meas / area_tot
idx_nonvoid = area_meas_bin > 0
final_mean = np.nansum(mean_bin * area_tot_bin) / area_tot
list_vgm = [(gsd * 5, 'Sph', std_stable**2)]
# list_vgm = [(corr_ranges[0],'Sph',final_num_err_corr[i,3]**2),(corr_ranges[1],'Sph',final_num_err_corr[i,2]**2),
# (corr_ranges[2],'Sph',final_num_err_corr[i,1]**2),(500000,'Sph',final_num_err_corr[i,0]**2)]
neff_num_tot = ot.neff_circ(area_meas, list_vgm)
final_err = ot.std_err(std_stable, neff_num_tot)
print(final_mean)
return final_mean, final_err, perc_area_meas, area_tot
else:
sensor = 'IB'
tmp_df = tmp_df.assign(reg=reg,sensor=sensor)
df = df.append(tmp_df)
#we want time series minus validation, easier to conceptualize
df.zsc = -df.zsc
df.dh = -df.dh
df.dh_ref = -df.dh_ref
#glacier only
df = df[np.abs(df.dh_ref)<300]
df = df[df.pos<=1]
#remove very large outliers
nmad_gla = nmad(df.zsc)
df=df[np.abs(df.zsc-np.nanmedian(df.zsc))<10*nmad_gla]
def bin_valid_df_by_vals(df,bins,bins_val,list_var=['dh','zsc'],ls_dvardt=True,weight_ib=1./40,return_ls=False):
mid_bin, med, std, dvardt, dvardt_2std, ns_ics, ns_ib = ([] for i in range(7))
for i in range(len(bins)-1):
ind = np.logical_and(bins_val >= bins[i],bins_val < bins[i+1])
df_ind = df[ind]
nics = np.count_nonzero(df_ind.sensor == 'ICS')
nib=np.count_nonzero(df_ind.sensor == 'IB')
ns_ics.append(nics)
ns_ib.append(nib)
mid_bin.append(bins[i] + 0.5*(bins[i+1]-bins[i]))
sub_med = []
# rasterize_mean_shp_point(coords,vals,fn_rast_out,fn_hr_out,500,100,fn_ref_raster=fn_ref_raster)
# latlon_coords_to_buff_point_shp(list(zip(df.lon.values,df.lat.values)),df.zsc.values,fn_shp_out,200.)
#AU FINAL:
fn_ref_raster = '/home/atom/ongoing/work_worldwide/dh_maps/01_02_rgi60_fig/fig3.vrt'
#get extent of interest
fn_icesat = '/home/atom/ongoing/work_worldwide/validation/old/icesat/valid_ICESat_01_0_rgi50_Alaska.csv'
df = pd.read_csv(fn_icesat, index_col=False)
ind = np.logical_and.reduce(
(df.lon > -145, df.lon < -137, df.lat > 59, df.lat < 62))
df = df[ind]
df = df[df.pos == 2]
nmad_zsc = nmad(df.zsc)
ind = np.abs(df.zsc) < 10 * nmad_zsc
print('Removing with NMAD: ' + str(np.count_nonzero(~ind)) + ' out of ' +
str(len(ind)))
df = df[ind]
df = df.drop(columns=['dh', 'dh_ref', 'curv', 'slp', 'dt', 't', 'pos', 'h'])
df.to_csv('/home/atom/ongoing/work_worldwide/fig3_icesat_df.csv')
#same
fn_ib = '/home/atom/ongoing/work_worldwide/validation/icebridge/valid_ILAKS1B_01_02_rgi60_50_pt.csv'
df = pd.read_csv(fn_ib, index_col=False)
ind = np.logical_and.reduce(
(df.lon > -145, df.lon < -137, df.lat > 59, df.lat < 62))
df = df[ind]
df = df[df.pos == 2]
nmad_zsc = nmad(df.zsc)
marker='o',
mec='k',
ms=kval * (df_hr_rgiid.area.values[0] / 1000000)**0.5,
mew=0.25,
elinewidth=0.5,
ecolor=col,
mfc=col,
alpha=0.9)
#,ecolor=colors[sites.index(data['Site'][value])]mfc=colors[sites.index(data['Site'][value])],alpha=0.5)
diff2.append(df_hr_rgiid.dhdt.values[0] - df_gp_rgiid.dhdt.values[0])
list_area2.append(df_hr_rgiid.area.values[0])
ax.text(-1.5,
0,
'Mean bias:\n' + str(np.round(np.nanmean(diff2), 2)) + '$\pm$' +
str(np.round(2 * nmad(diff2) / np.sqrt(len(diff2)), 2)) +
' m yr$^{-1}$',
ha='center',
va='center',
bbox=dict(boxstyle='round', facecolor='white', alpha=0.7))
print(np.nanmean(diff2))
print(
np.nansum(np.array(diff2) * np.array(list_area2)) /
np.nansum(np.array(list_area2)))
ax.set_ylabel('GP mean elevation change (m yr$^{-1}$)')
ax.set_xlabel('High-resolution DEMs mean elevation change (m yr$^{-1}$)')
#plt.legend(loc='upper left')
ax.set_xlim([-2.75, 0.5])
