def _parse_propfind(self, resp):
parser = XMLParser()
parser.load(resp)
tree = parser.get_tree()
name = '{{DAV:}}{}'.format
def get_response_name(elem):
href = elem.find(name('href'))
path = href.text.strip()
return os.path.basename(path)
return [get_response_name(ri) for ri in tree.findall(name('response'))]
def _path_changed(self, new):
self.datasource_url = 'Invalid Path'
if new:
if os.path.isfile(new):
self.datasource_url = os.path.join(os.path.basename(os.path.dirname(new)), os.path.basename(new))
self._parser = XMLParser(new)
self._load_projects()
self._load_mass_spectrometers()
self._load_irradiations()
self._load_sample_meta()
def load(self, path):
self.reset_layers()
parser = XMLParser(path)
self._load_detectors(parser)
def __init__(self, *args, **kw):
super(XMLExporter, self).__init__(*args, **kw)
from pychron.core.xml.xml_parser import XMLParser
xmlp = XMLParser()
self._parser = xmlp
def _assemble_xml(self):
return 'asfafasfafsd'
xp = XMLParser()
return xp.tostring()
def _assemble_xml(self):
return 'asfafasfafsd'
xp = XMLParser()
return xp.tostring()
def get_parser():
p = os.path.join(paths.setup_dir, 'dashboard.xml')
parser = XMLParser(p)
return parser
class XMLDatabase(Loggable):
kind = None
path = Str
projects = List
samples = List
irradiations = List
mass_spectrometers = List
_parser = Instance(XMLParser)
def _path_changed(self, new):
self.datasource_url = 'Invalid Path'
if new:
if os.path.isfile(new):
self.datasource_url = os.path.join(os.path.basename(os.path.dirname(new)), os.path.basename(new))
self._parser = XMLParser(new)
self._load_projects()
self._load_mass_spectrometers()
self._load_irradiations()
self._load_sample_meta()
def make_analyses(self, ans, **kw):
return self.get_analyses_uuid([ai.identifier for ai in ans], klass=XMLAnalysis)
# DatabaseAdapter interface
def session_ctx(self, *args, **kw):
return MockSession()
def get_projects(self, *args, **kw):
return self.projects
def get_mass_spectrometers(self):
return self.mass_spectrometers
def get_irradiations(self, *args, **kw):
return self.irradiations
def get_project_date_range(self, names):
dt = datetime.now()
return dt, dt
def get_project_labnumbers(self, projects, filter_non_run_samples=None, lp=None, hp=None,
analysis_types=None,
mass_spectrometers=None):
elems = self._parser.get_elements('Sample')
return [XMLLabnumber(i) for i in elems]
def get_labnumber_analyses(self, lns, **kw):
for li in lns:
elems = self._parser.get_elements('Sample')
for e in elems:
if e.get('igsn') == li:
ms = e.xpath('Parameters/Experiment/Measurement')
ans = [XMLAnalysisRecord(e, mi) for mi in ms]
return ans, len(ans)
def get_analysis_groups(self, *args, **kw):
return []
def get_analyses_uuid(self, uuids, klass=None):
if klass is None:
klass = XMLAnalysisRecord
ms = self._parser.get_elements('Parameters/Experiment/Measurement')
ans = []
for ui in uuids:
mi = next((mi for mi in ms if mi.get('measurementNumber') == ui))
cur = mi
while 1:
elem = cur.getparent()
if elem.tag == 'Sample':
break
else:
cur = elem
# elem = next((ei for ei in elems if ei.get('')))
ans.append(klass(elem, mi))
return ans
def get_labnumber_figures(self, lns):
return []
# private
def _load_projects(self):
elem = self._parser.get_elements('Parameters/Experiment')
self.projects = [XMLProjectRecordView(i.get('projectName')) for i in elem]
def _load_irradiations(self):
elem = self._parser.get_elements('Parameters/Experiment/Irradiation')
self.irradiations = [XMLIrradiationRecordView(i.get('irradiationName')) for i in elem]
def _load_mass_spectrometers(self):
elem = self._parser.get_elements('Parameters/Experiment')
self.mass_spectrometers = [XMLSpectrometerRecord(i.get('massSpectrometer')) for i in elem]
def _load_sample_meta(self):
elem = self._parser.get_elements('Sample')
pass