def test_initialize(self, mocker, tmpdir):
tester = cmdline.CLI()
m1 = mocker.patch('pyentrez.main.cmdline.GetParser.get_parser',
return_value=MockedParser.set_1(tmpdir))
tester.initialize()
assert tester.args.get('Home') == str(tmpdir)
assert m1.called
def test_run_pyentrez_notui(self, mocker):
tester = cmdline.CLI()
tester.args = test_args[1]
tester.args['verbose'] = None
tester.args['output'] = None
m0 = mocker.patch('pyentrez.configure_logger')
m1 = mocker.patch('pyentrez.main.cmdline.CLI.starttui')
m2 = mocker.patch('pyentrez.main.cmdline.CLI.notui')
tester.run_pyentrez()
assert m0.called
assert not m1.called
assert m2.called
def main(argv=None):
"""Execute the main application.
Creates instance of cmdline, runs it, and exits the application.
Args:
argv(List[str]): Arguments to be passed into the application for parsing.
"""
if sys.version_info > (3, 8):
cmd = cmdline.CLI()
cmd.execute()
cmd.clean_exit()
else:
raise Exception('Script needs to be run with Python 3.8')
def test_run_pyentrez_init(self, mocker):
tester = cmdline.CLI()
tester.args = test_args[2]
m1 = mocker.patch('pyentrez.main.user_cred.first_run')
tester.run_pyentrez()
assert m1.called
def test_run_pyentrez_version(self):
tester = cmdline.CLI()
tester.args = test_args[0]
tester.args['version'] = True
with pytest.raises(SystemExit):
tester.run_pyentrez()
def test_execute_earlyquit(self, mocker):
tester = cmdline.CLI()
m1 = mocker.patch('pyentrez.main.cmdline.CLI._run',
side_effect=exceptions.EarlyQuit("Raised"))
tester.execute()
assert tester.catastrophic_failure is True
def test_execute_keyboardinterrupt(self, mocker):
tester = cmdline.CLI()
m1 = mocker.patch('pyentrez.main.cmdline.CLI._run',
side_effect=KeyboardInterrupt)
tester.execute()
assert tester.catastrophic_failure is True
def test_mocker(self, mocker):
tester = cmdline.CLI()
m1 = mocker.patch('pyentrez.main.cmdline.CLI.execute')
tester.execute()
assert m1.called
assert tester.catastrophic_failure is False