def _writeSubmitScript(self):
"""mostly to be able to source .qsubrc on linux or qsubrc.bat on windows"""
if sys.platform.startswith('win'):
scriptPath = path.join(self.folder, 'submit.bat' )
qsubRc = path.expandvars( path.join("$HOME","qsubrc.bat") )
cmdL = ["@ECHO off"]
if path.exists(qsubRc):
cmdL.append('call "%s"'%qsubRc) # didn't actually tried if this feature works :p
cmdL.append('"%s" "%s"'%( sys.executable, launcherPath ) )
else:
scriptPath = path.join( self.folder, 'submit.sh' )
qsubRc = path.expandvars( path.join("$HOME",".qsubrc") )
cmdL = ["#!/usr/bin/env bash"]
if path.exists(qsubRc):
cmdL.append('source "%s"'%qsubRc)
cmdL.append('"%s" "%s"'%( sys.executable, launcherPath ) )
writeFile( '\n'.join( cmdL ), scriptPath )
os.chmod(scriptPath, 0o755)
return scriptPath
def writeCmd(self, cmd ):
cmdPath = path.join( self.folder, 'run' )
writeFile( cmd, cmdPath )
os.chmod( cmdPath, 0o755 )
