def test_init(self, init_prog):
prog = init_prog
prog = Viewer1D(None)
assert isinstance(prog, Viewer1D)
assert prog.viewer_type == 'Data1D'
assert prog.title == 'viewer1D'
assert prog.parent is not None
def setup_spread_UI(self):
self.ui.spread_widget = QtWidgets.QWidget()
self.ui.spread_widget.setLayout(QtWidgets.QVBoxLayout())
widget1D = QtWidgets.QWidget()
widget2D = QtWidgets.QWidget()
self.ui.spread_viewer_1D = Viewer1D(widget1D)
self.ui.spread_viewer_2D = Viewer2D(widget2D)
self.ui.spread_widget.layout().addWidget(widget1D)
self.ui.spread_widget.layout().addWidget(widget2D)
# todo: better connection as discussed
self.ui.spread_viewer_1D.ui.crosshair.crosshair_dragged.connect(self.get_nav_position)
self.ui.spread_viewer_1D.ui.crosshair_pb.click()
self.ui.spread_viewer_2D.get_action('autolevels').click()
# todo: better connection as discussed
self.ui.spread_viewer_2D.crosshair_dragged.connect(self.get_nav_position)
self.ui.spread_viewer_2D.get_action('crosshair').trigger()
self.ui.spread_widget.show()
self.ui.spread_widget.setVisible(False)
def setup_docks(self):
for dock in self.detector.viewer_docks:
self.detector.dockarea.moveDock(dock, 'right',
self.led_control.dock_manual)
self.dockarea.moveDock(self.led_control.dock_sequence, 'bottom',
self.led_control.dock_manual)
self.dockarea.moveDock(self.steps_sequencer.dock, 'bottom',
self.led_control.dock_manual)
self.dockarea.moveDock(self.manual_actuation.dock, 'right',
self.led_control.dock_manual)
self.show_dashboard(False)
QtWidgets.QApplication.processEvents()
self.steps_sequencer.dock.resize(QtCore.QSize(350, 100))
self.scan_live_dock = Dock('Live Scan Plot')
widget = QtWidgets.QWidget()
self.scan_live_viewer = Viewer1D(widget)
self.scan_live_dock.addWidget(widget)
self.dockarea.addDock(self.scan_live_dock, 'bottom',
self.detector.viewer_docks[0])
self.scan_live_dock.setVisible(False)
def set_GUI(self):
"""
Create the graphic interface of the h5 file analyser, including:
* *h5 file dock* : QtreeWidget (custom instance of Tree_layout) showing the contents of the h5 file
* *status bar* : the top_down information bar
* *tree_dock* : The QTree viewer
* *1D viewer dock* : the preview window of 1D data
* *2D viewer dock* : the preview window of 2D data
* *Navigator viewer dock* : the global navigator graphic interface
"""
# %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# h5 file dock
V_splitter = QtWidgets.QSplitter(Qt.Vertical)
H_splitter = QtWidgets.QSplitter(Qt.Horizontal)
Form = QtWidgets.QWidget()
self.ui.h5file_tree = Tree_layout(Form, col_counts=2, labels=["Node", 'Pixmap'])
self.ui.h5file_tree.ui.Tree.setMinimumWidth(250)
self.ui.h5file_tree.ui.Tree.itemClicked.connect(self.show_h5_attributes)
self.ui.h5file_tree.ui.Tree.itemDoubleClicked.connect(self.show_h5_data)
V_splitter.addWidget(Form)
self.ui.attributes_table = pymodaq_ptypes.Table_custom()
V_splitter.addWidget(self.ui.attributes_table)
H_splitter.addWidget(V_splitter)
self.ui.settings_tree = ParameterTree()
self.ui.settings_tree.setMinimumWidth(300)
H_splitter.addWidget(self.ui.settings_tree)
self.ui.menubar = self.mainwindow.menuBar()
self.create_menu(self.ui.menubar)
# %%create status bar
self.ui.statusbar = QtWidgets.QStatusBar()
self.ui.statusbar.setMaximumHeight(25)
# %% create tree dock
file_dock = Dock("File data", size=(1, 1), autoOrientation=False)
# give this dock the minimum possible size
file_dock.setOrientation('vertical')
file_dock.addWidget(H_splitter)
file_dock.addWidget(self.ui.statusbar)
self.settings = Parameter.create(name='Param', type='group')
self.ui.settings_tree.setParameters(self.settings, showTop=False)
# #%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# #% 1D viewer Dock
viewer1D_widget = QtWidgets.QWidget()
self.ui.viewer1D = Viewer1D(viewer1D_widget)
dock1D = Dock('Viewer1D')
dock1D.addWidget(viewer1D_widget)
# %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# % 2D viewer Dock
viewer2D_widget = QtWidgets.QWidget()
self.ui.viewer2D = Viewer2D(viewer2D_widget)
dock2D = Dock('Viewer2D')
dock2D.addWidget(viewer2D_widget)
# #%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# #% Navigator viewer Dock
navigator1D_widget = QtWidgets.QWidget()
self.ui.navigator1D = Viewer1D(navigator1D_widget)
self.ui.navigator1D.ui.crosshair.crosshair_dragged.connect(self.update_viewer_data)
self.ui.navigator1D.ui.crosshair_pb.click()
navigator2D_widget = QtWidgets.QWidget()
self.ui.navigator2D = Viewer2D(navigator2D_widget)
self.ui.navigator2D.crosshair_dragged.connect(
self.update_viewer_data) # export scaled position in conjonction with 2D scaled axes
self.ui.navigator2D.ui.crosshair_pb.click()
dock_nav = Dock('Navigator')
dock_nav.addWidget(navigator1D_widget)
dock_nav.addWidget(navigator2D_widget, 1, 0)
self.dockarea.addDock(file_dock, 'top')
self.dockarea.addDock(dock2D, 'right', file_dock)
self.dockarea.addDock(dock1D, 'bottom', dock2D)
self.dockarea.addDock(dock_nav, 'right', dock2D)
def show_positions(self):
widget = QtWidgets.QWidget()
viewer = Viewer1D(widget)
viewer.show_data([self.update_steps_calculation()])
dialog('Positions to be send to Tabular Scan', '', widget)
label = QtWidgets.QLabel(message)
label.setAlignment(QtCore.Qt.AlignCenter)
dlg.layout().addWidget(label)
dlg.layout().addWidget(widget)
button_box = QtWidgets.QDialogButtonBox(
QtWidgets.QDialogButtonBox.Ok | QtWidgets.QDialogButtonBox.Cancel)
dlg.layout().addWidget(button_box)
button_box.accepted.connect(dlg.accept)
button_box.rejected.connect(dlg.reject)
ret = dlg.exec()
return ret
def show_message(message="blabla", title="Error"):
DeprecationWarning(
'Using show_message is deprecated, please use messagebox in daq_utils.messenger module'
)
messagebox('Warning', title=title, text=message)
if __name__ == '__main__':
import sys
from pymodaq.daq_utils.plotting.data_viewers.viewer1D import Viewer1D
app = QtWidgets.QApplication([])
widget = QtWidgets.QWidget()
viewer = Viewer1D(widget)
ret = dialog('my dialog', 'this is a dialog do you want to proceed',
widget)
print(ret)
sys.exit(app.exec_())
def init_prog(qtbot):
form = QtWidgets.QWidget()
prog = Viewer1D(form)
qtbot.addWidget(prog)
yield prog
form.close()
def set_GUI(self):
"""
"""
# %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# main_layout = QtWidgets.QGridLayout()
# self.area.setLayout(main_layout)
# vsplitter = QtWidgets.QSplitter(Qt.Vertical)
# Hsplitter=QtWidgets.QSplitter(Qt.Horizontal)
params = [
{'title': 'Set data 4D', 'name': 'set_data_4D', 'type': 'action', 'visible': False},
{'title': 'Set data 3D', 'name': 'set_data_3D', 'type': 'action', 'visible': False},
{'title': 'Set data 2D', 'name': 'set_data_2D', 'type': 'action', 'visible': False},
{'title': 'Set data 1D', 'name': 'set_data_1D', 'type': 'action', 'visible': False},
{'title': 'Signal shape', 'name': 'data_shape_settings', 'type': 'group', 'children': [
{'title': 'Initial Data shape:', 'name': 'data_shape_init', 'type': 'str', 'value': "",
'readonly': True},
{'title': 'Axes shape:', 'name': 'nav_axes_shapes', 'type': 'group', 'children': [],
'readonly': True},
{'title': 'Data shape:', 'name': 'data_shape', 'type': 'str', 'value': "", 'readonly': True},
{'title': 'Navigator axes:', 'name': 'navigator_axes', 'type': 'itemselect'},
{'title': 'Set Nav axes:', 'name': 'set_nav_axes', 'type': 'action', 'visible': True},
]},
]
self.settings = Parameter.create(name='Param', type='group', children=params)
# #self.signal_axes_selection()
# connecting from tree
self.settings.sigTreeStateChanged.connect(self.parameter_tree_changed) # any changes on the settings
self.settings.child(('set_data_1D')).sigActivated.connect(lambda: self.set_data_test('1D'))
self.settings.child(('set_data_2D')).sigActivated.connect(lambda: self.set_data_test('2D'))
self.settings.child(('set_data_3D')).sigActivated.connect(lambda: self.set_data_test('3D'))
self.settings.child(('set_data_4D')).sigActivated.connect(lambda: self.set_data_test('4D'))
self.settings.child('data_shape_settings', 'set_nav_axes').sigActivated.connect(self.update_data)
# #%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# #% 1D signalviewer
viewer1D_widget = QtWidgets.QWidget()
self.ui.viewer1D = Viewer1D(viewer1D_widget)
self.ROI1D = LinearRegionItem()
self.ui.viewer1D.viewer.plotwidget.plotItem.addItem(self.ROI1D)
self.ui.combomath = QtWidgets.QComboBox()
self.ui.combomath.addItems(['Sum', 'Mean', 'Half-life'])
self.ui.viewer1D.ui.button_widget.addWidget(self.ui.combomath)
self.ui.combomath.currentIndexChanged.connect(self.update_Navigator)
self.ROI1D.sigRegionChangeFinished.connect(self.update_Navigator)
# % 2D viewer Dock
viewer2D_widget = QtWidgets.QWidget()
self.ui.viewer2D = Viewer2D(viewer2D_widget)
self.ui.viewer2D.set_action_visible('flip_ud', False)
self.ui.viewer2D.set_action_visible('flip_lr', False)
self.ui.viewer2D.set_action_visible('rotate', False)
self.ui.viewer2D.get_action('autolevels').trigger()
self.ui.viewer2D.get_action('ROIselect').trigger()
self.ROI2D = self.ui.viewer2D.ROIselect
self.ui.viewer2D.ROI_select_signal.connect(self.update_Navigator)
Dock_signal = Dock('Signal')
Dock_signal.addWidget(viewer1D_widget)
Dock_signal.addWidget(viewer2D_widget)
# #%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# #% Navigator viewer Dock
navigator1D_widget = QtWidgets.QWidget()
self.ui.navigator1D = Viewer1D(navigator1D_widget)
self.ui.navigator1D.ui.crosshair.crosshair_dragged.connect(self.update_viewer_data)
self.ui.navigator1D.ui.crosshair_pb.click()
self.ui.navigator1D.data_to_export_signal.connect(self.export_data)
navigator2D_widget = QtWidgets.QWidget()
self.ui.navigator2D = Viewer2D(navigator2D_widget)
self.ui.navigator2D.get_action('autolevels').trigger()
self.ui.navigator2D.crosshair_dragged.connect(
self.update_viewer_data) # export scaled position in conjonction with 2D scaled axes
self.ui.navigator2D.get_action('crosshair').trigger()
self.ui.navigator2D.data_to_export_signal.connect(self.export_data)
self.ui.navigation_widget = QtWidgets.QWidget()
# vlayout_navigation = QtWidgets.QVBoxLayout()
# self.navigator_label = QtWidgets.QLabel('Navigation View')
# self.navigator_label.setMaximumHeight(15)
# layout_navigation.addWidget(self.navigator_label)
self.ui.nav_axes_widget = QtWidgets.QWidget()
self.ui.nav_axes_widget.setLayout(QtWidgets.QVBoxLayout())
# vlayout_navigation.addWidget(navigator2D_widget)
# vlayout_navigation.addWidget(self.ui.nav_axes_widget)
self.ui.nav_axes_widget.setVisible(False)
# vlayout_navigation.addWidget(navigator1D_widget)
# self.ui.navigation_widget.setLayout(vlayout_navigation)
# vsplitter.insertWidget(0, self.ui.navigation_widget)
Dock_navigation = Dock('Navigation')
Dock_navigation.addWidget(navigator1D_widget)
Dock_navigation.addWidget(navigator2D_widget)
self.area.addDock(Dock_navigation)
self.area.addDock(Dock_signal, 'right', Dock_navigation)
# self.ui.signal_widget = QtWidgets.QWidget()
# VLayout1 = QtWidgets.QVBoxLayout()
# self.viewer_label = QtWidgets.QLabel('Data View')
# self.viewer_label.setMaximumHeight(15)
# VLayout1.addWidget(self.viewer_label)
# VLayout1.addWidget(viewer1D_widget)
# VLayout1.addWidget(viewer2D_widget)
# self.ui.signal_widget.setLayout(VLayout1)
# vsplitter.insertWidget(1, self.ui.signal_widget)
self.ui.set_signals_pb_1D = addaction('', icon_name='cartesian', checkable=True,
tip='Change navigation/signal axes')
self.ui.set_signals_pb_1D_bis = addaction('', icon_name='cartesian', checkable=True,
tip='Change navigation/signal axes')
self.ui.set_signals_pb_2D = addaction('', icon_name='cartesian', checkable=True,
tip='Change navigation/signal axes')
self.ui.set_signals_pb_2D_bis = addaction('', icon_name='cartesian', checkable=True,
tip='Change navigation/signal axes')
self.ui.navigator1D.ui.button_widget.addAction(self.ui.set_signals_pb_1D)
self.ui.navigator2D.toolbar.addAction(self.ui.set_signals_pb_2D)
self.ui.viewer1D.ui.button_widget.addAction(self.ui.set_signals_pb_1D_bis)
self.ui.viewer2D.toolbar.addAction(self.ui.set_signals_pb_2D_bis)
# main_layout.addWidget(vsplitter)
self.ui.set_signals_pb_1D.clicked.connect(self.signal_axes_selection)
self.ui.set_signals_pb_2D.clicked.connect(self.signal_axes_selection)
self.ui.set_signals_pb_1D_bis.clicked.connect(self.signal_axes_selection)
self.ui.set_signals_pb_2D_bis.clicked.connect(self.signal_axes_selection)
# to start: display as default a 2D navigator and a 1D viewer
self.ui.navigator1D.parent.setVisible(False)
self.ui.viewer2D.parent.setVisible(True)