예제 #1
0
def analyze(mf, verbose=logger.DEBUG, **kwargs):
    mol = mf.mol
    if not mol.symmetry:
        return ghf.analyze(mf, verbose, **kwargs)

    mo_energy = mf.mo_energy
    mo_occ = mf.mo_occ
    mo_coeff = mf.mo_coeff
    ovlp_ao = mf.get_ovlp()
    log = logger.new_logger(mf, verbose)
    if log.verbose >= logger.NOTE:
        nirrep = len(mol.irrep_id)
        orbsym = get_orbsym(mf.mol, mo_coeff, ovlp_ao, False)
        wfnsym = 0
        noccs = [sum(orbsym[mo_occ>0]==ir) for ir in mol.irrep_id]
        log.note('total symmetry = %s', symm.irrep_id2name(mol.groupname, wfnsym))
        log.note('occupancy for each irrep:  ' + (' %4s'*nirrep), *mol.irrep_name)
        log.note('double occ                 ' + (' %4d'*nirrep), *noccs)
        log.note('**** MO energy ****')
        irname_full = {}
        for k,ir in enumerate(mol.irrep_id):
            irname_full[ir] = mol.irrep_name[k]
        irorbcnt = {}
        for k, j in enumerate(orbsym):
            if j in irorbcnt:
                irorbcnt[j] += 1
            else:
                irorbcnt[j] = 1
            log.note('MO #%d (%s #%d), energy= %.15g occ= %g',
                     k+1, irname_full[j], irorbcnt[j], mo_energy[k], mo_occ[k])

    dm = mf.make_rdm1(mo_coeff, mo_occ)
    return mf.mulliken_meta(mol, dm, s=ovlp_ao, verbose=log)
예제 #2
0
파일: ghf_symm.py 프로젝트: chrinide/pyscf
def analyze(mf, verbose=logger.DEBUG, with_meta_lowdin=WITH_META_LOWDIN,
            **kwargs):
    mol = mf.mol
    if not mol.symmetry:
        return ghf.analyze(mf, verbose, **kwargs)

    mo_energy = mf.mo_energy
    mo_occ = mf.mo_occ
    mo_coeff = mf.mo_coeff
    ovlp_ao = mf.get_ovlp()
    log = logger.new_logger(mf, verbose)
    if log.verbose >= logger.NOTE:
        nirrep = len(mol.irrep_id)
        orbsym = get_orbsym(mf.mol, mo_coeff, ovlp_ao, False)
        wfnsym = 0
        noccs = [sum(orbsym[mo_occ>0]==ir) for ir in mol.irrep_id]
        log.note('total symmetry = %s', symm.irrep_id2name(mol.groupname, wfnsym))
        log.note('occupancy for each irrep:  ' + (' %4s'*nirrep), *mol.irrep_name)
        log.note('double occ                 ' + (' %4d'*nirrep), *noccs)
        log.note('**** MO energy ****')
        irname_full = {}
        for k,ir in enumerate(mol.irrep_id):
            irname_full[ir] = mol.irrep_name[k]
        irorbcnt = {}
        for k, j in enumerate(orbsym):
            if j in irorbcnt:
                irorbcnt[j] += 1
            else:
                irorbcnt[j] = 1
            log.note('MO #%d (%s #%d), energy= %.15g occ= %g',
                     k+MO_BASE, irname_full[j], irorbcnt[j], mo_energy[k],
                     mo_occ[k])

    dm = mf.make_rdm1(mo_coeff, mo_occ)
    dip = mf.dip_moment(mol, dm, verbose=log)
    if with_meta_lowdin:
        pop_and_chg = mf.mulliken_meta(mol, dm, s=ovlp_ao, verbose=log)
    else:
        pop_and_chg = mf.mulliken_pop(mol, dm, s=ovlp_ao, verbose=log)
    return pop_and_chg, dip