def test_format_otu_map(self):
"""format_otu_map functions as expected """
actual = sorted(format_otu_map(self.otu_map1, ''))
expected = sorted([
'0\tseq1\tseq2\tseq5\n', '1\tseq3\tseq4\n', '2\tseq6\tseq7\tseq8\n'
])
self.assertEqual(actual, expected)
def test_format_otu_map_prefix(self):
"""format_otu_map functions as expected w prefix"""
actual = sorted(format_otu_map(self.otu_map1, 'my.otu.'))
expected = sorted(['my.otu.0\tseq1\tseq2\tseq5\n',
'my.otu.1\tseq3\tseq4\n',
'my.otu.2\tseq6\tseq7\tseq8\n'])
self.assertEqual(actual, expected)
def test_format_otu_map(self):
"""format_otu_map functions as expected """
actual = sorted(format_otu_map(self.otu_map1, ''))
expected = sorted(['0\tseq1\tseq2\tseq5\n',
'1\tseq3\tseq4\n',
'2\tseq6\tseq7\tseq8\n'])
self.assertEqual(actual, expected)
def test_format_otu_map_error_on_bad_prefix(self):
"""format_otu_map functions as expected with bad prefix char"""
self.assertRaises(ValueError, list,
format_otu_map(self.otu_map1, 'my_otu_'))
def test_format_otu_map_error_on_bad_prefix(self):
"""format_otu_map functions as expected with bad prefix char"""
self.assertRaises(ValueError,list,
format_otu_map(self.otu_map1,'my_otu_'))
def test_format_otu_map(self):
"""format_otu_map functions as expected """
actual = sorted(format_otu_map(self.otu_map1, ""))
expected = sorted(["0\tseq1\tseq2\tseq5\n", "1\tseq3\tseq4\n", "2\tseq6\tseq7\tseq8\n"])
self.assertEqual(actual, expected)
