def determine_choices(region_code, nr_fractions, fraction_dose, my_window, choices):
# Default technique value, 'VMAT'
technique = 'VMAT'
# Default technique name, 'VMAT' or '3D-CRT'
technique_name = 'VMAT'
# Default optimization value
opt = ''
if region_code in RC.breast_tang_codes or region_code in RC.breast_partial_codes:
# Chosen technique value, 'VMAT' or 'Conformal'
technique = 'Conformal'
# Chosen technique name, 'VMAT' or '3D-CRT'
technique_name = '3D-CRT'
# Chosen optimization value
opt = 'oar'
elif region_code in RC.breast_reg_codes:
# Determine which technique choices which will appear in the form
techniques = RB.RadioButton('Planoppsett ', 'Velg planoppsett: ', PC.techniques)
# Collects the selected choices from the user
choices = collect_choices(techniques, my_window, [])
# Chosen technique value, 'VMAT' or 'Conformal'
technique = choices[0]
# Chosen technique name, 'VMAT' or '3D-CRT'
if technique == 'Conformal':
technique_name = '3D-CRT'
else:
technique_name = 'VMAT'
# Optimization value
opt = 'oar'
else:
if region_code in RC.palliative_codes and nr_fractions*fraction_dose < 55 and not PF.is_stereotactic(nr_fractions, fraction_dose) or region_code in RC.bladder_codes or region_code in RC.prostate_codes and nr_fractions*fraction_dose < 40 or region_code in RC.brain_whole_codes:
opt = 'oar'
results = [technique, technique_name, opt]
return results
def determine_choices(region_code, prescription, my_window, choices):
# Default technique value, 'VMAT'
technique = 'VMAT'
# Default technique name, 'VMAT' or '3D-CRT'
technique_name = 'VMAT'
# Default optimization value
opt = ''
if region_code in RC.breast_tang_codes or region_code in RC.breast_partial_codes:
# Partial breast or whole breast:
# Chosen technique value, 'VMAT' or 'Conformal'
technique = 'Conformal'
# Chosen technique name, 'VMAT' or '3D-CRT'
technique_name = '3D-CRT'
# Chosen optimization value
opt = 'oar'
elif region_code in RC.breast_reg_codes:
# Regional breast:
# Determine which technique choices which will appear in the form
techniques = RB.RadioButton('Planoppsett ', 'Velg planoppsett: ',
PC.techniques)
# Collects the selected choices from the user
choices = collect_choices(techniques, my_window, [])
# Chosen technique value, 'VMAT' or 'Conformal'
technique = choices[0]
# Chosen technique name, 'VMAT' or '3D-CRT'
if technique == 'Conformal':
technique_name = '3D-CRT'
else:
technique_name = 'VMAT'
# Optimization value
opt = 'oar'
elif region_code in RC.palliative_codes and not prescription.is_stereotactic(
):
# Palliative (non-SBRT):
opt = 'oar'
elif region_code in RC.bladder_codes:
# Bladder:
opt = 'oar'
elif region_code in RC.prostate_codes and prescription.total_dose < 40:
# Palliative prostate:
opt = 'oar'
elif region_code in RC.brain_whole_codes:
# Whole brain:
opt = 'oar'
elif region_code in RC.bone_stereotactic_codes:
# Bone SBRT:
opt = 'oar'
results = [technique, technique_name, opt]
return results
def handle_existing_rois(pm, ss):
if SSF.has_roi_with_contours(ss):
delete = RB.RadioButton('Eksisterende ROIs oppdaget', 'Velg:',
DC.delete)
my_window = Tk()
choice_d = []
delete_choice = collect_delete_choice(delete, my_window, choice_d)
for i in range(len(delete_choice)):
if delete_choice[i] == 'yes':
# All ROIs are to be deleted:
PMF.delete_all_rois(pm)
elif delete_choice[i] == 'some':
# Only non-delineated ROIs are to be deleted:
PMF.delete_rois_except_manually_contoured(pm, ss)
my_window = Toplevel()
else:
my_window = Tk()
return my_window
def collect_choices(options, my_window, choices):
# Set up GUI windows
frame = FRAME.RadioButtonFrame(my_window, options)
frame.grid(row=0, column=0)
my_window.mainloop()
# Extract information from the users's selections in the GUI:
if frame.ok:
(selection, value) = frame.get_results()
elif not frame.ok:
print("Script execution cancelled by user...")
sys.exit(0)
else:
messagebox.showinfo("Error.", "Unexpected error.")
sys.exit(0)
choices.append(value)
if selection.children:
new_window = Toplevel()
next_options = RB.RadioButton(selection.next_category.capitalize(),
'Velg ' + selection.next_category + ':',
selection.children)
selection = collect_choices(next_options, new_window, choices)
choices.append(value)
return choices
roi = None
for k in range(len(oar_list)):
if roi_dict.get(oar_list[k]):
roi = oar_list[k]
break
return roi
# Setup GUI choices:
parameter_property = []
for i in range(len(parameter_list)):
parameter_property.append(P.Property(parameter_list[i], parameter_list[i]))
# Create radio button object
options = RB.RadioButton('Statistikk', 'Velg:', parameter_property)
# Setup and run GUI:
my_window = Toplevel()
frame = FRAME.StatisticsFrame(my_window, options)
frame.grid(row=0, column=0)
my_window.mainloop()
# Extract information from the users's selections in the GUI:
if frame.ok:
checkBoxes = frame.checkbuttons
variables = frame.variables
(start_date, stop_date, stereotactic, conv) = frame.get_results()
elif not frame.ok:
print("Script execution cancelled by user...")
sys.exit(0)
ROIS.kidneys,
ROIS.stomach, ROIS.liver, ROIS.small_bowel,
ROIS.colon, ROIS.brachial, ROIS.bowel_space, ROIS.rectum, ROIS.z_rectum_p, ROIS.anal_canal, ROIS.bladder,
ROIS.femoral_l, ROIS.femoral_r,
ROIS.external, ROIS.body,
ROIS.markers, ROIS.prosthesis_l, ROIS.prosthesis_r, ROIS.couch,
]
oar_list.sort(key=get_my_key)
# Setup GUI choices:
oar_property = []
for i in range(len(oar_list)):
oar_property.append(P.Property(oar_list[i].name, oar_list[i].name))
# Create radio button object
options = RB.RadioButton('ROI','Velg:', oar_property)
# Setup and run GUI:
my_window = Tk()
frame = FRAME.CheckButtonFrame(my_window, options)
frame.grid(row = 0,column = 0)
my_window.mainloop()
# Extract information from the users's selections in the GUI:
if frame.ok:
checkBoxes = frame.checkbuttons
variables = frame.variables
elif not frame.ok:
print ("Script execution cancelled by user...")
sys.exit(0)
else:
def __init__(self, patient_db, patient, case):
self.patient_db = patient_db
self.patient = patient
self.case = case
#messagebox.showinfo("Error.","hei")
pm = case.PatientModel
examination = get_current("Examination")
ss = PMF.get_structure_set(pm, examination)
# Check if the last CT has been set as primary, and display a warning if not.
#success = TS_C.TSCase(case).last_examination_used_test()
#if not success:
# GUIF.handle_primary_is_not_most_recent_ct()
# Check if any ROIs exist, and if they have a contour in the current Structure Set.
# If there is, ask to delete rois.
if SSF.has_roi_with_contours(ss):
delete = RB.RadioButton('Eksisterende ROIs oppdaget', 'Velg:',
DC.delete)
my_window = Tk()
choice_d = []
delete_choice = GUIF.collect_delete_choice(delete, my_window,
choice_d)
for i in range(len(delete_choice)):
# If the delete all rois choice was selected, delete rois.
if delete_choice[i] == 'yes':
PMF.delete_all_rois(pm)
elif delete_choice[i] == 'some':
PMF.delete_rois_except_manually_contoured(pm, ss)
my_window = Toplevel()
else:
my_window = Tk()
# Create initial radiobutton object, then recursively iterate it to collect all user choices:
regions = RB.RadioButton('Behandlingsregion',
'Velg behandlingsregion:', DC.regions)
choices = GUIF.collect_choices(regions, my_window, [])
# Create site:
site = DS.DefSite(patient_db,
pm,
examination,
ss,
choices,
targets=[],
oars=[])
# Choice 1: Which region is going to be treated?
region = choices[0]
if region == 'brain':
import def_brain as DEF_BRAIN
DEF_BRAIN.DefBrain(pm, examination, ss, choices, site)
elif region == 'lung':
import def_lung as DEF_LUNG
DEF_LUNG.DefLung(pm, examination, ss, choices, site)
elif region == 'breast':
import def_breast as DEF_BREAST
DEF_BREAST.DefBreast(pm, examination, ss, choices, site)
elif region == 'bladder':
import def_bladder as DEF_BLADDER
DEF_BLADDER.DefBladder(pm, examination, ss, choices, site)
elif region == 'prostate':
import def_prostate as DEF_PROSTATE
DEF_PROSTATE.DefProstate(pm, examination, ss, choices, site)
elif region == 'rectum':
import def_rectum as DEF_RECTUM
DEF_RECTUM.DefRectum(pm, examination, ss, choices, site)
elif region == 'other':
import def_palliative as DEF_PALLIATIVE
DEF_PALLIATIVE.DefPalliative(pm, examination, ss, choices, site)
# Changes OrganType to "Other" for all ROIs in the given patient model which are of type "Undefined" or "Marker".
PMF.exclude_rois_from_export(pm)
PMF.set_all_undefined_to_organ_type_other(pm)
i += 1
name = prefix + " " + str(i)
available = True
for p in plan.VerificationPlans:
if p.BeamSet.DicomPlanLabel == name:
available = False
if available:
break
# Radiobutton choices for dose grid:
c2mm = P.Property('Konvensjonell VMAT (2 mm)', '0.2', default=True)
c1mm = P.Property('Stereotaksi (1 mm)', '0.1')
choices = [c2mm, c1mm]
# Create radio button object
options = RB.RadioButton('VMAT QA', 'Velg dosematrise:', choices)
# Setup and run GUI:
my_window = Tk()
frame = FRAME.RadioButtonFrame(my_window, options)
frame.grid(row=0, column=0)
my_window.mainloop()
# Extract information from the users's selections in the GUI:
if frame.ok:
(selection, value) = frame.get_results()
elif not frame.ok:
print("Script execution cancelled by user...")
sys.exit(0)
else:
messagebox.showinfo("Error.", "Unexpected error.")
def __init__(self, patient_db, patient, case):
self.patient_db = patient_db
self.patient = patient
self.case = case
# Load patient model, examination and structure set:
pm = case.PatientModel
examination = get_current("Examination")
ss = PMF.get_structure_set(pm, examination)
# Check if the last CT has been set as primary, and display a warning if not.
# (This is activated in the plan script, but currently not here in the def script)
#success = TS_C.TSCase(case).last_examination_used_test()
#if not success:
# GUIF.handle_primary_is_not_most_recent_ct()
# Handle existing ROIs (if there are any):
my_window = GUIF.handle_existing_rois(pm, ss)
# Create initial radiobutton object, then recursively iterate it to collect all user choices:
regions = RB.RadioButton('Behandlingsregion',
'Velg behandlingsregion:', DC.regions)
choices = GUIF.collect_choices(regions, my_window, [])
# Create site:
site = DS.DefSite(patient_db,
pm,
examination,
ss,
choices,
targets=[],
oars=[])
# Choice 1: Which region is going to be treated?
region = choices[0]
# Execute the def script which corresponds to the user choice:
if region == 'brain':
import def_brain as DEF_BRAIN
DEF_BRAIN.DefBrain(pm, examination, ss, choices, site)
elif region == 'lung':
import def_lung as DEF_LUNG
DEF_LUNG.DefLung(pm, examination, ss, choices, site)
elif region == 'breast':
import def_breast as DEF_BREAST
DEF_BREAST.DefBreast(pm, examination, ss, choices, site)
elif region == 'bladder':
import def_bladder as DEF_BLADDER
DEF_BLADDER.DefBladder(pm, examination, ss, choices, site)
elif region == 'prostate':
import def_prostate as DEF_PROSTATE
DEF_PROSTATE.DefProstate(pm, examination, ss, choices, site)
elif region == 'rectum':
import def_rectum as DEF_RECTUM
DEF_RECTUM.DefRectum(pm, examination, ss, choices, site)
elif region == 'other':
import def_palliative as DEF_PALLIATIVE
DEF_PALLIATIVE.DefPalliative(pm, examination, ss, choices, site)
# Changes OrganType to "Other" for all ROIs in the given patient model which are of type "Undefined" or "Marker".
PMF.exclude_rois_from_export(pm)
PMF.set_all_undefined_to_organ_type_other(pm)
def palliative_beamset_form(ss, my_window):
beam_set_options = RB.RadioButton('Multiple målvolum oppdaget', 'Velg ønsket oppsett for plan/beam set: ', PC.beam_set_choices(ss))
choices = collect_choices(beam_set_options, my_window, [])
return choices