def actualSetUp(self, add_errors=False, freqwin=1, block=False, dospectral=True, dopol=False):
self.npixel = 256
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = freqwin
self.vis_list = list()
self.ntimes = 5
self.times = numpy.linspace(-3.0, +3.0, self.ntimes) * numpy.pi / 12.0
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
if freqwin > 1:
self.channelwidth = numpy.array(freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.channelwidth = numpy.array([1e6])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
if dospectral:
flux = numpy.array([f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
else:
flux = numpy.array([f])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg, dec=-60.0 * u.deg, frame='icrs', equinox='J2000')
self.vis = ingest_unittest_visibility(self.low, self.frequency, self.channelwidth, self.times,
self.vis_pol, self.phasecentre, block=block)
self.model = create_unittest_model(self.vis, self.image_pol, npixel=self.npixel)
def actualSetUp(self, freqwin=1, block=False, dopol=False, zerow=False):
self.npixel = 1024
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = freqwin
self.vis_list = list()
self.ntimes = 5
self.cellsize = 0.0005
# Choose the interval so that the maximum change in w is smallish
integration_time = numpy.pi * (24 / (12 * 60))
self.times = numpy.linspace(-integration_time * (self.ntimes // 2),
integration_time * (self.ntimes // 2),
self.ntimes)
if freqwin > 1:
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
self.channelwidth = numpy.array(
freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.frequency = numpy.array([1.0e8])
self.channelwidth = numpy.array([4e7])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
self.phasecentre = SkyCoord(ra=+30.0 * u.deg,
dec=-60.0 * u.deg,
frame='icrs',
equinox='J2000')
self.vis_list = [
ingest_unittest_visibility(self.low, [self.frequency[freqwin]],
[self.channelwidth[freqwin]],
self.times,
self.vis_pol,
self.phasecentre,
block=block,
zerow=zerow)
for freqwin, _ in enumerate(self.frequency)
]
def actualSetUp(self, freqwin=1, block=True, dopol=False, zerow=False):
self.npixel = 1024
self.low = create_named_configuration('LOWBD2', rmax=550.0)
self.freqwin = freqwin
self.blockvis_list = list()
self.ntimes = 5
self.cellsize = 0.0005
# Choose the interval so that the maximum change in w is smallish
integration_time = numpy.pi * (24 / (12 * 60))
self.times = numpy.linspace(-integration_time * (self.ntimes // 2),
integration_time * (self.ntimes // 2),
self.ntimes)
if freqwin > 1:
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
self.channelwidth = numpy.array(
freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.frequency = numpy.array([1.0e8])
self.channelwidth = numpy.array([4e7])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
self.phasecentre = SkyCoord(ra=+0.0 * u.deg,
dec=-40.0 * u.deg,
frame='icrs',
equinox='J2000')
self.blockvis_list = [
ingest_unittest_visibility(self.low, [self.frequency[freqwin]],
[self.channelwidth[freqwin]],
self.times,
self.vis_pol,
self.phasecentre,
block=block,
zerow=zerow)
for freqwin, _ in enumerate(self.frequency)
]
self.vis_list = [
convert_blockvisibility_to_visibility(bv)
for bv in self.blockvis_list
]
self.skymodel_list = [
create_low_test_skymodel_from_gleam(
npixel=self.npixel,
cellsize=self.cellsize,
frequency=[self.frequency[f]],
phasecentre=self.phasecentre,
polarisation_frame=PolarisationFrame("stokesI"),
flux_limit=0.6,
flux_threshold=1.0,
flux_max=5.0) for f, freq in enumerate(self.frequency)
]
assert isinstance(self.skymodel_list[0].image,
Image), self.skymodel_list[0].image
assert isinstance(self.skymodel_list[0].components[0],
Skycomponent), self.skymodel_list[0].components[0]
assert len(self.skymodel_list[0].components) == 35, len(
self.skymodel_list[0].components)
self.skymodel_list = expand_skymodel_by_skycomponents(
self.skymodel_list[0])
assert len(self.skymodel_list) == 36, len(self.skymodel_list)
assert numpy.max(numpy.abs(
self.skymodel_list[-1].image.data)) > 0.0, "Image is empty"
self.vis_list = [
copy_visibility(self.vis_list[0], zero=True)
for i, _ in enumerate(self.skymodel_list)
]
def actualSetUp(self,
add_errors=False,
freqwin=3,
block=True,
dospectral=True,
dopol=False,
zerow=False,
makegcfcf=False):
self.npixel = 256
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = freqwin
self.bvis_list = list()
self.ntimes = 5
self.cellsize = 0.0005
# Choose the interval so that the maximum change in w is smallish
integration_time = numpy.pi * (24 / (12 * 60))
self.times = numpy.linspace(-integration_time * (self.ntimes // 2),
integration_time * (self.ntimes // 2),
self.ntimes)
if freqwin > 1:
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
self.channelwidth = numpy.array(
freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.frequency = numpy.array([1.0e8])
self.channelwidth = numpy.array([4e7])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
if dospectral:
flux = numpy.array(
[f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
else:
flux = numpy.array([f])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg,
dec=-60.0 * u.deg,
frame='icrs',
equinox='J2000')
self.bvis_list = [
ingest_unittest_visibility(
self.low,
numpy.array([self.frequency[freqwin]]),
numpy.array([self.channelwidth[freqwin]]),
self.times,
self.vis_pol,
self.phasecentre,
block=block,
zerow=zerow) for freqwin, _ in enumerate(self.frequency)
]
self.model_list = [
create_unittest_model(self.bvis_list[freqwin],
self.image_pol,
cellsize=self.cellsize,
npixel=self.npixel)
for freqwin, _ in enumerate(self.frequency)
]
self.components_list = [
create_unittest_components(self.model_list[freqwin],
flux[freqwin, :][numpy.newaxis, :],
single=False)
for freqwin, _ in enumerate(self.frequency)
]
self.model_list = [
insert_skycomponent(self.model_list[freqwin],
self.components_list[freqwin])
for freqwin, _ in enumerate(self.frequency)
]
self.bvis_list = [
dft_skycomponent_visibility(self.bvis_list[freqwin],
self.components_list[freqwin])
for freqwin, _ in enumerate(self.frequency)
]
centre = self.freqwin // 2
# Calculate the model convolved with a Gaussian.
self.model = self.model_list[centre]
self.cmodel = smooth_image(self.model)
if self.persist:
export_image_to_fits(self.model,
'%s/test_imaging_model.fits' % self.dir)
if self.persist:
export_image_to_fits(self.cmodel,
'%s/test_imaging_cmodel.fits' % self.dir)
if add_errors and block:
self.bvis_list = [
insert_unittest_errors(self.bvis_list[i])
for i, _ in enumerate(self.frequency)
]
self.components = self.components_list[centre]
if makegcfcf:
self.gcfcf = [
create_awterm_convolutionfunction(self.model,
nw=61,
wstep=16.0,
oversampling=8,
support=64,
use_aaf=True)
]
self.gcfcf_clipped = [
(self.gcfcf[0][0],
apply_bounding_box_convolutionfunction(self.gcfcf[0][1],
fractional_level=1e-3))
]
self.gcfcf_joint = [
create_awterm_convolutionfunction(self.model,
nw=11,
wstep=16.0,
oversampling=8,
support=64,
use_aaf=True)
]
else:
self.gcfcf = None
self.gcfcf_clipped = None
self.gcfcf_joint = None
def actualSetUp(self,
add_errors=False,
freqwin=7,
block=False,
dospectral=True,
dopol=False,
zerow=True):
self.npixel = 256
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = freqwin
self.vis_list = list()
self.ntimes = 5
cellsize = 0.001
self.times = numpy.linspace(-3.0, +3.0, self.ntimes) * numpy.pi / 12.0
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
if freqwin > 1:
self.channelwidth = numpy.array(
freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.channelwidth = numpy.array([1e6])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
if dospectral:
flux = numpy.array(
[f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
else:
flux = numpy.array([f])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg,
dec=-60.0 * u.deg,
frame='icrs',
equinox='J2000')
self.vis_list = [
ingest_unittest_visibility(self.low, [self.frequency[freqwin]],
[self.channelwidth[freqwin]],
self.times,
self.vis_pol,
self.phasecentre,
block=block,
zerow=zerow)
for freqwin, _ in enumerate(self.frequency)
]
self.model_imagelist = [
create_unittest_model(self.vis_list[freqwin],
self.image_pol,
cellsize=cellsize,
npixel=self.npixel)
for freqwin, _ in enumerate(self.frequency)
]
self.componentlist = [
create_unittest_components(self.model_imagelist[freqwin],
flux[freqwin, :][numpy.newaxis, :])
for freqwin, _ in enumerate(self.frequency)
]
self.model_imagelist = [
insert_skycomponent(self.model_imagelist[freqwin],
self.componentlist[freqwin])
for freqwin, _ in enumerate(self.frequency)
]
self.vis_list = [
dft_skycomponent_visibility(self.vis_list[freqwin],
self.componentlist[freqwin])
for freqwin, _ in enumerate(self.frequency)
]
# Calculate the model convolved with a Gaussian.
model = self.model_imagelist[0]
self.cmodel = smooth_image(model)
if self.persist:
export_image_to_fits(
model,
'%s/test_imaging_serial_deconvolved_model.fits' % self.dir)
if self.persist:
export_image_to_fits(
self.cmodel,
'%s/test_imaging_serial_deconvolved_cmodel.fits' % self.dir)
if add_errors and block:
self.vis_list = [
insert_unittest_errors(self.vis_list[i])
for i, _ in enumerate(self.frequency)
]
def actualSetUp(self, zerow=True):
self.doplot = False
self.npixel = 256
self.cellsize = 0.0009
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = 1
self.vis_list = list()
self.ntimes = 3
self.times = numpy.linspace(-2.0, +2.0, self.ntimes) * numpy.pi / 12.0
if self.freqwin == 1:
self.frequency = numpy.array([1e8])
self.channelwidth = numpy.array([4e7])
else:
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
self.channelwidth = numpy.array(
self.freqwin * [self.frequency[1] - self.frequency[0]])
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
flux = numpy.array(
[f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg,
dec=-60.0 * u.deg,
frame='icrs',
equinox='J2000')
self.vis = ingest_unittest_visibility(self.low,
self.frequency,
self.channelwidth,
self.times,
self.vis_pol,
self.phasecentre,
block=False,
zerow=zerow)
self.model = create_unittest_model(self.vis,
self.image_pol,
cellsize=self.cellsize,
npixel=self.npixel,
nchan=self.freqwin)
self.components = create_unittest_components(self.model,
flux,
applypb=False,
scale=0.5,
single=False,
symmetric=True)
self.model = insert_skycomponent(self.model, self.components)
self.vis = predict_skycomponent_visibility(self.vis, self.components)
# Calculate the model convolved with a Gaussian.
self.cmodel = smooth_image(self.model)
if self.persist:
export_image_to_fits(self.model,
'%s/test_gridding_model.fits' % self.dir)
export_image_to_fits(self.cmodel,
'%s/test_gridding_cmodel.fits' % self.dir)
pb = create_pb_generic(self.model,
diameter=35.0,
blockage=0.0,
use_local=False)
self.cmodel.data *= pb.data
if self.persist:
export_image_to_fits(self.cmodel,
'%s/test_gridding_cmodel_pb.fits' % self.dir)
self.peak = numpy.unravel_index(
numpy.argmax(numpy.abs(self.cmodel.data)), self.cmodel.shape)
f = numpy.array([100.0])
if dospectral:
flux = numpy.array(
[f * numpy.power(freq / 1e8, -0.7) for freq in frequency])
else:
flux = numpy.array([f])
phasecentre = SkyCoord(ra=+180.0 * u.deg,
dec=-45.0 * u.deg,
frame='icrs',
equinox='J2000')
blockvis = ingest_unittest_visibility(low,
frequency,
channelwidth,
times,
blockvis_pol,
phasecentre,
block=block,
zerow=zerow)
vis = convert_blockvisibility_to_visibility(blockvis)
model = create_unittest_model(vis, image_pol, npixel=npixel, nchan=freqwin)
components = create_unittest_components(model, flux)
model = insert_skycomponent(model, components)
blockvis = predict_skycomponent_visibility(blockvis, components)
#blockvis = dft_skycomponent_visibility(blockvis, components)
blockvis1 = copy_visibility(blockvis)
def actualSetUp(self,
nfreqwin=3,
dospectral=True,
dopol=False,
amp_errors=None,
phase_errors=None,
zerow=True):
if amp_errors is None:
amp_errors = {'T': 0.0, 'G': 0.1}
if phase_errors is None:
phase_errors = {'T': 1.0, 'G': 0.0}
self.npixel = 512
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = nfreqwin
self.vis_list = list()
self.ntimes = 1
self.times = numpy.linspace(-3.0, +3.0, self.ntimes) * numpy.pi / 12.0
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
if self.freqwin > 1:
self.channelwidth = numpy.array(
self.freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.channelwidth = numpy.array([1e6])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
if dospectral:
flux = numpy.array(
[f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
else:
flux = numpy.array([f])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg,
dec=-60.0 * u.deg,
frame='icrs',
equinox='J2000')
self.blockvis_list = [
ingest_unittest_visibility(self.low, [self.frequency[i]],
[self.channelwidth[i]],
self.times,
self.vis_pol,
self.phasecentre,
block=True,
zerow=zerow) for i in range(nfreqwin)
]
for v in self.blockvis_list:
v.data['vis'][...] = 1.0 + 0.0j
self.error_blockvis_list = [
copy_visibility(v) for v in self.blockvis_list
]
gt = create_gaintable_from_blockvisibility(self.blockvis_list[0])
gt = simulate_gaintable(gt,
phase_error=0.1,
amplitude_error=0.0,
smooth_channels=1,
leakage=0.0)
self.error_blockvis_list = [
apply_gaintable(self.error_blockvis_list[i], gt)
for i in range(self.freqwin)
]
assert numpy.max(
numpy.abs(self.error_blockvis_list[0].vis -
self.blockvis_list[0].vis)) > 0.0
def actualSetUp(self,
freqwin=1,
block=False,
dospectral=True,
dopol=False,
zerow=False):
self.npixel = 512
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = freqwin
self.vis = list()
self.ntimes = 5
self.times = numpy.linspace(-3.0, +3.0, self.ntimes) * numpy.pi / 12.0
if freqwin > 1:
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
self.channelwidth = numpy.array(
freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.frequency = numpy.array([1e8])
self.channelwidth = numpy.array([1e6])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, -10.0, 1.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
if dospectral:
flux = numpy.array(
[f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
else:
flux = numpy.array([f])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg,
dec=-60.0 * u.deg,
frame='icrs',
equinox='J2000')
self.vis = ingest_unittest_visibility(self.low, [self.frequency],
[self.channelwidth],
self.times,
self.vis_pol,
self.phasecentre,
block=block,
zerow=zerow)
self.model = create_unittest_model(self.vis,
self.image_pol,
npixel=self.npixel)
self.components = create_unittest_components(self.model, flux)
self.model = insert_skycomponent(self.model, self.components)
self.vis = predict_skycomponent_visibility(self.vis, self.components)
# Calculate the model convolved with a Gaussian.
self.cmodel = smooth_image(self.model)
if self.persist:
export_image_to_fits(self.model,
'%s/test_imaging_model.fits' % self.dir)
if self.persist:
export_image_to_fits(self.cmodel,
'%s/test_imaging_cmodel.fits' % self.dir)
def actualSetUp(self, add_errors=False, nfreqwin=7, dospectral=True, dopol=False, zerow=True):
self.npixel = 512
self.low = create_named_configuration('LOWBD2', rmax=750.0)
self.freqwin = nfreqwin
self.vis_list = list()
self.ntimes = 5
self.times = numpy.linspace(-3.0, +3.0, self.ntimes) * numpy.pi / 12.0
self.frequency = numpy.linspace(0.8e8, 1.2e8, self.freqwin)
if self.freqwin > 1:
self.channelwidth = numpy.array(self.freqwin * [self.frequency[1] - self.frequency[0]])
else:
self.channelwidth = numpy.array([1e6])
if dopol:
self.vis_pol = PolarisationFrame('linear')
self.image_pol = PolarisationFrame('stokesIQUV')
f = numpy.array([100.0, 20.0, 0.0, 0.0])
else:
self.vis_pol = PolarisationFrame('stokesI')
self.image_pol = PolarisationFrame('stokesI')
f = numpy.array([100.0])
if dospectral:
flux = numpy.array([f * numpy.power(freq / 1e8, -0.7) for freq in self.frequency])
else:
flux = numpy.array([f])
self.phasecentre = SkyCoord(ra=+180.0 * u.deg, dec=-60.0 * u.deg, frame='icrs', equinox='J2000')
self.blockvis_list = [ingest_unittest_visibility(self.low,
[self.frequency[i]],
[self.channelwidth[i]],
self.times,
self.vis_pol,
self.phasecentre, block=True,
zerow=zerow)
for i in range(nfreqwin)]
self.vis_list = [convert_blockvisibility_to_visibility(bv) for bv in self.blockvis_list]
self.model_imagelist = [
create_unittest_model(self.vis_list[i], self.image_pol, npixel=self.npixel, cellsize=0.0005)
for i in range(nfreqwin)]
self.components_list = [create_unittest_components(self.model_imagelist[freqwin],
flux[freqwin, :][numpy.newaxis, :])
for freqwin, m in enumerate(self.model_imagelist)]
self.blockvis_list = [
dft_skycomponent_visibility(self.blockvis_list[freqwin], self.components_list[freqwin])
for freqwin, _ in enumerate(self.blockvis_list)]
self.model_imagelist = [insert_skycomponent(self.model_imagelist[freqwin], self.components_list[freqwin])
for freqwin in range(nfreqwin)]
model = self.model_imagelist[0]
self.cmodel = smooth_image(model)
if self.persist:
export_image_to_fits(model, '%s/test_imaging_serial_model.fits' % self.dir)
export_image_to_fits(self.cmodel, '%s/test_imaging_serial_cmodel.fits' % self.dir)
if add_errors:
gt = create_gaintable_from_blockvisibility(self.blockvis_list[0])
gt = simulate_gaintable(gt, phase_error=0.1, amplitude_error=0.0, smooth_channels=1, leakage=0.0)
self.blockvis_list = [apply_gaintable(self.blockvis_list[i], gt)
for i in range(self.freqwin)]
self.vis_list = [convert_blockvisibility_to_visibility(bv) for bv in self.blockvis_list]
self.model_imagelist = [
create_unittest_model(self.vis_list[i], self.image_pol, npixel=self.npixel, cellsize=0.0005)
for i in range(nfreqwin)]
