def main(argv):
debug = False
try:
opts, args = getopt.getopt(argv, "hd", ["debug"])
except getopt.GetoptError:
sys.exit(2)
for opt, arg in opts:
if opt == '-h':
print('daily_run.py -d')
sys.exit()
elif opt in ('-d', '--debug'):
print('DEBUG MODE')
debug = True
print("BEGIN")
s3 = boto3.resource('s3')
studies = [
{
'region': 'US',
'state': 'New York'
},
{
'region': 'US',
'state': 'California'
},
{
'region': 'US',
'state': 'New Jersey'
},
{
'region': 'US',
'state': 'Connecticut'
},
{
'region': 'US',
'state': 'Massachusetts'
},
{
'region': 'US',
'state': 'New Hampshire'
},
{
'region': 'US',
'state': 'Florida'
},
{
'region': 'US',
'state': 'Texas'
},
{
'region': 'US',
'state': 'Georgia'
},
{
'region': 'France',
'state': ''
},
{
'region': 'Italy',
'state': ''
},
{
'region': 'Spain',
'state': ''
},
{
'region': 'United Kingdom',
'state': ''
},
{
'region': 'Portugal',
'state': ''
},
{
'region': 'Belgium',
'state': ''
},
{
'region': 'United Kingdom',
'state': ''
},
{
'region': 'Sweden',
'state': ''
},
{
'region': 'Netherlands',
'state': ''
},
]
calcdate = datetime.today().strftime('%Y-%m-%d')
#---------------------------
#this is going to be the master index.html, with links to all previous calculations
ri = Report()
ri.set_localfolder(
'./report/',
True) #set to True to erase previous results on local folder
#get the list of previous calculations from the S3 bucket
#create an empty list if the database does not exist
try:
s3.Bucket('covid-statistics').download_file('index.json',
'./report/index.json')
with open('./report/index.json') as json_file:
previous_calc = json.load(json_file)
except:
previous_calc = {'index': []}
#---------------------------
#the study3() function returns the name of the html page that links to the results
#this link gets added to the index.html file in the bucket
links = []
for s in studies:
try:
title = "COVID Statistics for {} {} as of {}".format(
s['region'], s['state'], calcdate)
subfolder = calcdate + '-' + s['region'] + '-' + s['state']
#study3 should return a Report object that contains the figures to be displayed on the website
r = study3(source='Johns Hopkins',
region=s['region'],
state=s['state'],
cutoff_positive=1,
cutoff_death=1,
truncate=0,
window=2)
r.set_localfolder('./report/', erase=False)
r.to_html(title=title,
subfolder=subfolder,
index_filename='index.html',
template_name='study.html')
#add a link to the index of calculations for the master index.html
link = subfolder.replace(" ", "_") + '/index.html'
links.append({
'index': link,
'region': s['region'],
'state': s['state']
})
#r.copy_to_s3('covid-statistics')
del r
gc.collect()
except:
traceback.print_exc()
#update and save the database of links to calculations results
previous_calc['index'].insert(0, {
'calc_date': calcdate,
'countries': links
})
with open('./report/index.json', 'w') as outfile:
json.dump(previous_calc, outfile)
#generate a new index.html page linking to all previous calculation results
ri.record('previous_calc', previous_calc['index'], '')
ri.to_html('COVID Statistics',
subfolder='',
index_filename='index.html',
template_name='index.html')
#copy the whole thing to S3
if not debug:
print("COPY TO S3")
ri.copy_to_s3('covid-statistics')
#add a link to the index of calculations for the master index.html
link = subfolder.replace(" ", "_") + '/index.html'
links.append({
'index': link,
'region': s['region'],
'state': s['state']
})
#r.copy_to_s3('covid-statistics')
del r
gc.collect()
except:
traceback.print_exc()
#update and save the database of links to calculations results
previous_calc['index'].insert(0, {'calc_date': calcdate, 'countries': links})
with open('./report/index.json', 'w') as outfile:
json.dump(previous_calc, outfile)
#generate a new index.html page linking to all previous calculation results
ri.record('previous_calc', previous_calc['index'], '')
ri.to_html('COVID Statistics',
subfolder='',
index_filename='index.html',
template_name='index.html')
#copy the whole thing to S3
ri.copy_to_s3('covid-statistics')
