def recreatetags(srrlist, srrfile, args):
listdir = os.listdir()
keeplist = []
srsfiles = []
for f in sorted(srrlist[0]):
if re.search(r'\.srs$', f, re.IGNORECASE) is None:
keeplist.append(f)
continue
srsfiles.append(f)
srs = SRS(filename=f, binary=args['srs_bin'])
srslist = srs.listfiles()
keeplist.append(srslist[0])
inputfile = os.path.join(os.getcwd(), srslist[0])
if '/' in srslist[0]:
outputdir = srslist[0].split('/')[0]
else:
outputdir = os.getcwd()
if not os.path.exists(inputfile):
fr = r'^' + srslist[0].split('/')[-1].split('-')[0] + r'[-_ ].*\.' + srslist[0].split('.')[-1] + r'$'
for f in listdir:
if f == inputfile.split('/')[-1] or re.search(fr, f, re.IGNORECASE) is not None:
try:
shutil.copy(f, inputfile)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
if srs.recreate(inputfile, output=outputdir) == True:
break
else:
try:
os.unlink(inputfile)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
elif srs.recreate(inputfile, output=outputdir) == False:
return False
if not os.path.isfile(inputfile):
return False
if len(keeplist) > 0 and len(srsfiles) > 0 and deleteothers(keeplist, srrfile) == False:
return False
def recreatetags(srrlist, srrfile, args):
listdir = os.listdir(os.getcwd())
keeplist = []
srsfiles = []
for srsfile in sorted(srrlist[0]):
if re.search(r'\.srs$', srsfile, re.IGNORECASE) is None:
keeplist.append(srsfile)
continue
srsfiles.append(srsfile)
srs = SRS(filename=srsfile, binary=args['srs_bin'])
srsinfo = srs.info()
if srsinfo == False:
continue
keeplist.append(srsinfo[0])
if '/' in srsfile:
outdir = os.path.join(os.getcwd(), srsfile.split('/')[0])
if not os.path.isdir(outdir):
try:
os.mkdir(outdir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
else:
outdir = os.getcwd()
infile = None
if os.path.isfile(os.path.join(outdir, srsinfo[0])):
infile = os.path.join(outdir, srsinfo[0])
elif os.path.isfile(os.path.join(os.getcwd(), srsinfo[0])):
infile = os.path.join(os.getcwd(), srsinfo[0])
else:
print 'Input file not found: %s' % (srsinfo[0])
if infile is None:
infile = os.path.join(outdir, srsinfo[0])
fr = r'^' + srsinfo[0].split('/')[-1].split('-')[0] + r'[-_ ].*\.' + srsinfo[0].split('.')[-1] + r'$'
for srsfile in listdir:
if srsfile == infile.split(os.sep)[-1] or re.search(fr, srsfile, re.IGNORECASE) is not None:
try:
shutil.copy(srsfile, infile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if srs.recreate(infile, outdir=outdir) == True:
break
else:
try:
os.unlink(infile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
elif srs.recreate(infile, outdir=outdir) == False:
return False
if infile == os.path.join(os.getcwd(), srsinfo[0]) and outdir != os.getcwd():
try:
os.unlink(infile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if sfvverify(args, opts='-r') == False:
return False
if len(keeplist) > 0 and len(srsfiles) > 0 and deleteothers(keeplist, srrfile) == False:
return False
return None
def recreatesample(srr, srrlist, args):
for f in srrlist[0]:
if re.search(r'\.srs$', f, re.IGNORECASE) is None:
continue
srsfile = f
if not os.path.isfile(srsfile) and os.path.isfile(os.path.basename(f)):
srsfile = os.path.basename(f)
if not os.path.isfile(srsfile):
return False
srs = SRS(filename=srsfile, binary=args['srs_bin'])
srsinfo = srs.info()
if srsinfo == False:
continue
defaultdir = os.path.join(os.getcwd(), 'Sample')
if '/' in srsfile:
sampledir = os.path.join(os.getcwd(), srsfile.split('/')[0])
else:
sampledir = defaultdir
if not os.path.isdir(sampledir):
try:
os.mkdir(sampledir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if sampledir != defaultdir and os.path.isdir(defaultdir):
try:
for s in os.listdir(defaultdir):
shutil.copy(os.path.join(defaultdir, s), sampledir)
shutil.rmtree(defaultdir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if os.path.isfile(os.path.join(os.getcwd(), srsinfo[0])):
try:
shutil.move(os.path.join(os.getcwd(), srsinfo[0]), sampledir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
sample = None
if os.path.isfile(os.path.join(sampledir, srsinfo[0])):
sample = os.path.join(sampledir, srsinfo[0])
if sample is not None:
print '\'%s\' found, sample exists.' % (os.path.dirname(sample).split(os.sep)[-1] + os.sep + sample.split(os.sep)[-1])
if crc(sample) == srsinfo[2] and args['force'] == False:
try:
os.unlink(srsfile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
continue
try:
os.unlink(sample)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
srsinput = None
if os.path.isfile(srrlist[1][0]):
srsinput = srrlist[1][0]
elif os.path.isfile(srrlist[1][0].split('/')[-1]):
srsinput = srrlist[1][0].split('/')[-1]
if srsinput is not None:
if srs.recreate(infile=srsinput, outdir=sampledir + os.sep) == False:
return False
try:
os.unlink(srsfile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
return None
def recreatesample(srr, srrlist, args):
sampledir = os.path.join(os.getcwd(), 'Sample')
for f in srrlist[0]:
if re.search(r'\.srs$', f, re.IGNORECASE) is None:
continue
srs = SRS(filename=f, binary=args['srs_bin'])
srslist = srs.listfiles()
sample = None
if os.path.isfile(os.path.join(os.getcwd(), srslist[0])):
sample = os.path.join(os.getcwd(), srslist[0])
if not os.path.isdir(sampledir):
try:
os.mkdir(sampledir)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
try:
shutil.move(sample, sampledir)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
if os.path.isfile(os.path.join(os.getcwd(), 'Sample', srslist[0])):
sample = os.path.join('Sample', srslist[0])
if sample is not None:
print('%r found, sample exists.' % (sample))
if args['force'] == False:
try:
os.unlink(f)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
continue
try:
os.unlink(sample)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
srsinput = None
if os.path.isfile(srrlist[1][0]):
srsinput = srrlist[1][0]
elif os.path.isfile(srrlist[1][0].split('/')[-1]):
srsinput = srrlist[1][0].split('/')[-1]
if srsinput is not None:
if srs.recreate(input=srsinput) == False:
return False
try:
os.unlink(f)
except:
if len(str(sys.exc_info()[1])) > 0:
print(sys.exc_info()[1])
return False
def recreatetags(srrlist, srrfile, args):
listdir = os.listdir(os.getcwd())
keeplist = []
srsfiles = []
for srsfile in sorted(srrlist[0]):
if re.search(r'\.srs$', srsfile, re.IGNORECASE) is None:
keeplist.append(srsfile)
continue
srsfiles.append(srsfile)
srs = SRS(filename=srsfile, binary=args['srs_bin'])
srsinfo = srs.info()
if srsinfo == False:
continue
keeplist.append(srsinfo[0])
if '/' in srsfile:
outdir = os.path.join(os.getcwd(), srsfile.split('/')[0])
if not os.path.isdir(outdir):
try:
os.mkdir(outdir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
else:
outdir = os.getcwd()
infile = None
if os.path.isfile(os.path.join(outdir, srsinfo[0])):
infile = os.path.join(outdir, srsinfo[0])
elif os.path.isfile(os.path.join(os.getcwd(), srsinfo[0])):
infile = os.path.join(os.getcwd(), srsinfo[0])
else:
print 'Input file not found: %s' % (srsinfo[0])
if infile is None:
infile = os.path.join(outdir, srsinfo[0])
fr = r'^' + srsinfo[0].split('/')[-1].split(
'-')[0] + r'[-_ ].*\.' + srsinfo[0].split('.')[-1] + r'$'
for srsfile in listdir:
if srsfile == infile.split(os.sep)[-1] or re.search(
fr, srsfile, re.IGNORECASE) is not None:
try:
shutil.copy(srsfile, infile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if srs.recreate(infile, outdir=outdir) == True:
break
else:
try:
os.unlink(infile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
elif srs.recreate(infile, outdir=outdir) == False:
return False
if infile == os.path.join(os.getcwd(),
srsinfo[0]) and outdir != os.getcwd():
try:
os.unlink(infile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if sfvverify(args, opts='-r') == False:
return False
if len(keeplist) > 0 and len(srsfiles) > 0 and deleteothers(
keeplist, srrfile) == False:
return False
return None
def recreatesample(srr, srrlist, args):
for f in srrlist[0]:
if re.search(r'\.srs$', f, re.IGNORECASE) is None:
continue
srsfile = f
if not os.path.isfile(srsfile) and os.path.isfile(os.path.basename(f)):
srsfile = os.path.basename(f)
if not os.path.isfile(srsfile):
return False
srs = SRS(filename=srsfile, binary=args['srs_bin'])
srsinfo = srs.info()
if srsinfo == False:
continue
defaultdir = os.path.join(os.getcwd(), 'Sample')
if '/' in srsfile:
sampledir = os.path.join(os.getcwd(), srsfile.split('/')[0])
else:
sampledir = defaultdir
if not os.path.isdir(sampledir):
try:
os.mkdir(sampledir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if sampledir != defaultdir and os.path.isdir(defaultdir):
try:
for s in os.listdir(defaultdir):
shutil.copy(os.path.join(defaultdir, s), sampledir)
shutil.rmtree(defaultdir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
if os.path.isfile(os.path.join(os.getcwd(), srsinfo[0])):
try:
shutil.move(os.path.join(os.getcwd(), srsinfo[0]), sampledir)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
sample = None
if os.path.isfile(os.path.join(sampledir, srsinfo[0])):
sample = os.path.join(sampledir, srsinfo[0])
if sample is not None:
print '\'%s\' found, sample exists.' % (
os.path.dirname(sample).split(os.sep)[-1] + os.sep +
sample.split(os.sep)[-1])
if crc(sample) == srsinfo[2] and args['force'] == False:
try:
os.unlink(srsfile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
continue
try:
os.unlink(sample)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
srsinput = None
if os.path.isfile(srrlist[1][0]):
srsinput = srrlist[1][0]
elif os.path.isfile(srrlist[1][0].split('/')[-1]):
srsinput = srrlist[1][0].split('/')[-1]
if srsinput is not None:
if srs.recreate(infile=srsinput,
outdir=sampledir + os.sep) == False:
return False
try:
os.unlink(srsfile)
except:
if len(str(sys.exc_info()[1])) > 0:
print sys.exc_info()[1]
return False
return None