info = "NA"
info.rstrip()
tissue_cell = ws["C" + str(rownum)]
tissue = tissue_cell.value
if tissue is None:
tissue = "NA"
tissue.rstrip()
sample = Sample(sample_id, info, tissue)
in_family = True
family.append(sample)
if sample.info.find("singleton") != -1:
# Found a singleton!
sample.affected = True
update_family(family)
print >> out, family_ped(family, family_count).rstrip()
# This ends the current family.
if config.debug:
print(sys.stderr, "Found a singleton. Family complete.")
family = []
in_family = False
# Note that the next row may be a None or a new family member..
samples_found += 1
elif cell.value is None:
# Value None means an empty row.
if in_family:
# This ends the current family.
