def test_set_model_history():
creators = [
factory.Creator(familyName='Koenig',
givenName="Matthias",
email="*****@*****.**",
organization="Test organisation")
]
sbmlns = libsbml.SBMLNamespaces(3, 1)
doc = libsbml.SBMLDocument(sbmlns)
model = doc.createModel()
history.set_model_history(model, creators)
# check if history was written correctly
h = model.getModelHistory()
assert h is not None
assert h.getNumCreators() == 1
c = h.getCreator(0)
assert 'Koenig' == c.getFamilyName()
assert 'Matthias' == c.getGivenName()
assert '*****@*****.**' == c.getEmail()
assert 'Test organisation' == c.getOrganization()
<ol>
<li>Redistributions of this SBML file must retain the above copyright notice, this list of conditions
and the following disclaimer.</li>
<li>Redistributions in a different form must reproduce the above copyright notice, this list of
conditions and the following disclaimer in the documentation and/or other materials provided
with the distribution.</li>
</ol>
This model is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</p>
</div>
</body>
""".format(settings.VERSION, '{}')
creators = [
mc.Creator(familyName='Koenig',
givenName='Matthias',
email='*****@*****.**',
organization='Humboldt University Berlin',
site='http://livermetabolism.com')
]
main_units = {
'time': 'h',
'extent': 'mmole',
'substance': 'mmole',
'length': 'm',
'area': 'm2',
'volume': UNIT_KIND_LITRE,
}
units = [
mc.Unit('h', [(UNIT_KIND_SECOND, 1.0, 0, 3600)], name="hour"),
mc.Unit('kg', [(UNIT_KIND_KILOGRAM, 1.0)], name="kilogram"),
mc.Unit('m', [(UNIT_KIND_METRE, 1.0)], name="meter"),
# -*- coding=utf-8 -*-
"""
Template information for the model creation.
"""
from datetime import datetime
import sbmlutils.factory as factory
# id : ('FamilyName', 'GivenName', 'Email', 'Organization')
creators = [
factory.Creator(
familyName="Koenig",
givenName="Matthias",
email="*****@*****.**",
organization="Humboldt-University Berlin, Institute for Theoretical Biology",
site="https://livermetabolism.com",
)
]
terms_of_use = """
<div class="dc:provenance">The content of this model has been carefully created in a manual research effort.</div>
<div class="dc:publisher">This file has been created by
<a href="{site}" title="{given_name} {family_name}" target="_blank">{given_name} {family_name}</a>.</div>
<h2>Terms of use</h2>
<div class="dc:rightsHolder">Copyright © {year} {given_name} {family_name}.</div>
<div class="dc:license">
<p>Redistribution and use of any part of this model, with or without modification, are permitted provided
that the following conditions are met:
<ol>
# -*- coding=utf-8 -*-
"""
Template information for the model creation.
"""
from datetime import datetime
import sbmlutils.factory as factory
# id : ('FamilyName', 'GivenName', 'Email', 'Organization')
creators = [
factory.Creator(
familyName='Koenig',
givenName='Matthias',
email='*****@*****.**',
organization=
'Humboldt-University Berlin, Institute for Theoretical Biology',
site="https://livermetabolism.com")
]
terms_of_use = """
<div class="dc:provenance">The content of this model has been carefully created in a manual research effort.</div>
<div class="dc:publisher">This file has been created by
<a href="{site}" title="{given_name} {family_name}" target="_blank">{given_name} {family_name}</a>.</div>
<h2>Terms of use</h2>
<div class="dc:rightsHolder">Copyright © {year} {given_name} {family_name}.</div>
<div class="dc:license">
<p>Redistribution and use of any part of this model, with or without modification, are permitted provided
that the following conditions are met:
<ol>
<li>Redistributions of this SBML file must retain the above copyright notice, this list of conditions and
the following disclaimer.</li>