def test_parse_genes_selection(testdir, mock_testclass): parameters = 'parameters_selection.txt' copyfile( Path(__file__).parent.joinpath('parameters_selection.txt'), parameters) copyfile(Path(__file__).parent.joinpath('genes.txt'), 'genes.txt') selection = Path(__file__).parent.joinpath('selection.txt') genes = v.parse_genes(parameters, selection) assert genes[0] == 'YLR110C' assert genes[1] == 'YGL008C'
def test_parse_genes(testdir, mock_testclass): parameters = 'parameters.txt' copyfile(Path(__file__).parent.joinpath('parameters.txt'), parameters) copyfile(Path(__file__).parent.joinpath('genes.txt'), 'genes.txt') genes = v.parse_genes(parameters) assert genes[0] == 'YDR524W-C' assert genes[1] == 'YLR355C' assert genes[2] == 'YLR110C' assert genes[3] == 'YGR192C' assert genes[4] == 'YGL008C' assert genes[5] == 'YKL060C'