import nose
import shutil
import yaml
from .. import tmp_sdss
from sherlock.utKit import utKit
# load settings
stream = file(
"/Users/Dave/git_repos/sherlock/example_settings.yaml", 'r')
settings = yaml.load(stream)
stream.close()
# SETUP AND TEARDOWN FIXTURE FUNCTIONS FOR THE ENTIRE MODULE
moduleDirectory = os.path.dirname(__file__)
utKit = utKit(moduleDirectory)
log, dbConn, pathToInputDir, pathToOutputDir = utKit.setupModule()
utKit.tearDownModule()
# xnose-class-to-test-main-command-line-function-of-module
class test_tmp_sdss():
def test_tmp_sdss_function(self):
kwargs = {}
kwargs["log"] = log
kwargs["settings"] = settings
kwargs["pathToDataFile"] = "/Users/Dave/Desktop/milliquas.txt"
kwargs["catalogueName"] = "tcs_cat_sdss_dr12_spect_galaxies_qsos"
# xt-kwarg_key_and_value
from __future__ import print_function
from builtins import str
import os
import unittest
import shutil
import yaml
from sherlock.utKit import utKit
from fundamentals import tools
from os.path import expanduser
home = expanduser("~")
packageDirectory = utKit("").get_project_root()
settingsFile = packageDirectory + "/test_settings.yaml"
su = tools(
arguments={"settingsFile": settingsFile},
docString=__doc__,
logLevel="DEBUG",
options_first=False,
projectName=None,
defaultSettingsFile=False
)
arguments, settings, log, dbConn = su.setup()
# SETUP PATHS TO COMMON DIRECTORIES FOR TEST DATA
moduleDirectory = os.path.dirname(__file__)
pathToInputDir = moduleDirectory + "/input/"
pathToOutputDir = moduleDirectory + "/output/"
try:
shutil.rmtree(pathToOutputDir)
su = tools(arguments={"settingsFile": None},
docString=__doc__,
logLevel="DEBUG",
options_first=False,
projectName="sherlock")
arguments, settings, log, dbConn = su.setup()
# # load settings
# stream = file(
# "/Users/Dave/.config/sherlock/sherlock.yaml", 'r')
# settings = yaml.load(stream)
# stream.close()
# SETUP AND TEARDOWN FIXTURE FUNCTIONS FOR THE ENTIRE MODULE
moduleDirectory = os.path.dirname(__file__)
utKit = utKit(moduleDirectory)
log, dbConn, pathToInputDir, pathToOutputDir = utKit.setupModule()
utKit.tearDownModule()
# load settings
stream = file(pathToInputDir + "/example_settings.yaml", 'r')
settings = yaml.load(stream)
stream.close()
import shutil
try:
shutil.rmtree(pathToOutputDir)
except:
pass
# COPY INPUT TO OUTPUT DIR
shutil.copytree(pathToInputDir, pathToOutputDir)
