def __deepcopy__(self, memo):
"""Return a deep copy of this MSA.
Returns
-------
TabularMSA
Deep copy of this MSA.
See Also
--------
__copy__
"""
seqs = (copy.deepcopy(seq, memo) for seq in self._seqs)
# Copying index isn't necessary because pd.Index is immutable.
msa_copy = self.__class__(sequences=seqs,
index=self.index,
metadata=None,
positional_metadata=None)
msa_copy._metadata = MetadataMixin._deepcopy_(self, memo)
msa_copy._positional_metadata = \
PositionalMetadataMixin._deepcopy_(self, memo)
return msa_copy
def __deepcopy__(self, memo):
"""Return a deep copy of this MSA.
Returns
-------
TabularMSA
Deep copy of this MSA.
See Also
--------
__copy__
"""
seqs = (copy.deepcopy(seq, memo) for seq in self._seqs)
# Copying index isn't necessary because pd.Index is immutable.
msa_copy = self.__class__(sequences=seqs, index=self.index,
metadata=None, positional_metadata=None)
msa_copy._metadata = MetadataMixin._deepcopy_(self, memo)
msa_copy._positional_metadata = \
PositionalMetadataMixin._deepcopy_(self, memo)
return msa_copy
def __deepcopy__(self, memo):
copy = self.__class__(self._axis_len, positional_metadata=None)
copy._positional_metadata = \
PositionalMetadataMixin._deepcopy_(self, memo)
return copy
def __deepcopy__(self, memo):
copy = self.__class__(self._axis_len, positional_metadata=None)
copy._positional_metadata = PositionalMetadataMixin._deepcopy_(self, memo)
return copy
