def get_ingredients(self):
if self.has_ingredients:
return self.dictionaries['ING'].get_med_list()
elif self.valid and self.has_ingredients is None:
self.dictionaries['ING'] = md.MedicationDictionary(dict_src='RXNORM_ING', dict_id=self.cui)
if self.has_hist:
cui_list = self.api.get_historical_info(self.cui, 'bossConcept')
if cui_list and 'baseRxcui' in cui_list[0].keys():
for i in cui_list:
_rxc = get_rxcui(i['baseRxcui'])
self.dictionaries['ING'].add_med_with_id(_rxc, _rxc.cui)
self.has_ingredients = True
else:
self.has_ingredients = False
else:
cui_list = self.api.get_rxcui_ingredients(self.cui)
if len(cui_list) > 0:
for tty, i in cui_list.items():
for cui in i:
_rxc = get_rxcui(cui['rxcui'])
self.dictionaries['ING'].add_med_with_id(_rxc, _rxc.cui)
self.has_ingredients = True
else:
self.has_ingredients = False
self.ing_checked = True
return self.dictionaries['ING'].get_med_list()
else:
return None
def __init__(self, in_file, file_delim=','):
self.path = in_file
self.file_name = util.get_filename(in_file)
self.delim = file_delim
self.file_lines = self.get_file_lines()
self.c_records = 0
self.records = {}
self.headers = util.read_config_value('INFILE_KEYS')
self.trackers = {}
self.cui_types = []
self.m_dict = md.MedicationDictionary(self.file_name, link=self)
MedKit.med_kits[self.file_name] = self
m.Medication.med_id_list[self.file_name] = {}
self.med_list = m.Medication.med_id_list[self.file_name]
def add_dict(self, src, id):
self.dictionaries[src] = md.MedicationDictionary(src, id)