measure = DataFactory.get_gre_measures()
#bamber = DataFactory.get_bamber()
direc = os.path.dirname(os.path.realpath(__file__))
# load a mesh :
mesh = Mesh("../meshes/mesh.xml")
# create data objects to use with varglas :
dsr = DataInput(None, searise, mesh=mesh, create_proj=True)
#dbm = DataInput(None, bamber, mesh=mesh)
dms = DataInput(None, measure, mesh=mesh, create_proj=True, flip=True)
dms.change_projection(dsr)
dsr.set_data_min('H', 10.0, 10.0)
H = dsr.get_projection("H")
S = dsr.get_projection("h")
adot = dsr.get_projection("adot")
prb = VelocityBalance_2(mesh, H, S, adot, 12.0)
prb.solve_forward()
# File ouput
do = DataOutput('results/greenland_balance_velocity_v2/')
d_out = {'Ubmag' : prb.Ubmag,
'H' : prb.H,
'adot' : prb.adot,
'S' : prb.S,
from gmshpy import *
from scipy.interpolate import RectBivariateSpline
from src.utilities import DataInput
#===============================================================================
# data preparation :
thklim = 200.0
# collect the raw data :
#measures = DataFactory.get_ant_measures()
#bedmap1 = DataFactory.get_bedmap1(thklim=thklim)
#bedmap2 = DataFactory.get_bedmap2(thklim=thklim)
dbv = DataInput("../results/", ("v_mag.mat", ), gen_space=False)
dbv.set_data_min('v_mag', 0.0, 0.0)
dbv.set_data_max('v_mag', 400.0, 400.0)
#db2 = DataInput(None, bedmap2, gen_space=False)
# might want to refine off of thickness :
#H = db2.data['H'].copy().T
# ensure that there are no values less than 1 for taking log :
#vel = dsr.data['U_ob'].copy().T
vel = dbv.data['v_mag'].copy().T
vel += 1
# invert the sections where the velocity is low to refine at divide :
data = log(vel)
#mv = data.max()
set_log_active(True)
var_measures = DataFactory.get_ant_measures()
var_bedmap1 = DataFactory.get_lebrocq()
var_bedmap2 = DataFactory.get_bedmap2()
mesh = MeshFactory.get_antarctica_coarse()
flat_mesh = MeshFactory.get_antarctica_coarse()
dm = DataInput(None, var_measures, mesh=mesh,flip=True)
db1 = DataInput(None, var_bedmap1, mesh=mesh)
db2 = DataInput(None, var_bedmap2, mesh=mesh, flip=True)
thklim = 50.0
db2.set_data_min("H", thklim, thklim)
db2.set_data_min("h", 0.0,0.0)
db2.set_data_max("H",30000.,thklim)
db2.set_data_max("h",30000.,0.0)
db2.data['b'] = db2.data['h']-db2.data['H']
db1.data['srfTemp'] += 273.15
db1.data['q_geo'] *= 60**2*24*365
Surface = db2.get_spline_expression("h")
Bed = db2.get_spline_expression("b")
SurfaceTemperature = db1.get_spline_expression("srfTemp")
BasalHeatFlux = db1.get_spline_expression("q_geo")
direc = os.path.dirname(os.path.realpath(__file__))
# load a mesh :
mesh = Mesh("./mesh_5km.xml")
# create data objects to use with varglas :
dsr = DataInput(None, searise, mesh=mesh)
dbam = DataInput(None, bamber, mesh=mesh)
dms = DataInput(None, measure, mesh=mesh, flip=True)
dms.change_projection(dsr)
# Bound data to managable values
MAX_V_ERR = 500
NO_DATA = -99
MAX_V = 1e5
dbam.set_data_min('H', 200.0, 200.0)
dbam.set_data_min('h', 1.0, 1.0)
dms.set_data_min('sp',0.0,-1.0)
dms.set_data_min('ex',-MAX_V_ERR,NO_DATA)
dms.set_data_max('ex',MAX_V_ERR,NO_DATA)
dms.set_data_min('ey',-MAX_V_ERR,NO_DATA)
dms.set_data_max('ey',MAX_V_ERR,NO_DATA)
dms.set_data_min('vx',-MAX_V,NO_DATA)
dms.set_data_max('vx',MAX_V,NO_DATA)
dms.set_data_min('vy',-MAX_V,NO_DATA)
dms.set_data_max('vy',MAX_V,NO_DATA)
print "Projecting data onto mesh..."
H = dbam.get_interpolation("H",kx=1,ky=1)
measure = DataFactory.get_gre_measures()
bamber = DataFactory.get_bamber()
direc = os.path.dirname(os.path.realpath(__file__))
# load a mesh :
mesh = Mesh("./mesh.xml")
# create data objects to use with varglas :
dsr = DataInput(None, searise, mesh=mesh, create_proj=True)
dbam = DataInput(None, bamber, mesh=mesh)
dms = DataInput(None, measure, mesh=mesh, create_proj=True, flip=True)
dms.change_projection(dsr)
dbam.set_data_min('H', 200.0, 200.0)
dbam.set_data_min('h', 1.0, 1.0)
dms.set_data_min('sp',0.0,-2e9)
H = dbam.get_projection("H")
H0 = dbam.get_projection("H")
S = dbam.get_projection("h")
adot = dsr.get_projection("adot")
Uobs = dms.get_projection("sp")
Uobs.vector()[Uobs.vector().array()<0] = 0.0
U_sar_spline = dms.get_spline_expression("sp")
insar_mask = CellFunctionSizet(mesh)
prb = VelocityBalance_2(mesh, H, S, adot, 12.0)
prb.solve_forward()
# File ouput
do = DataOutput('results/greenland_balance_velocity_v2/')
d_out = {'U_bal_mag' : prb.Ubmag,
'H' : prb.H,
'adot' : prb.adot,
'S' : prb.S,
'slope' : prb.slope,
'residual' : prb.residual}
do.write_dict_of_files(d_out)
do.write_dict_of_files(d_out, extension='.xml')
do.write_one_file('sp', dms.get_projection('sp'))
#do.write_matlab(dbm, prb.Ubmag, 'results/Ubmag.mat')
dbv = DataInput('results/', ('Ubmag.mat',), mesh=mesh)
dbv.set_data_min('Ubmag', 0.0, 0.0)
ass = dbv.integrate_field('sp', dmss, 'Ubmag', val=50)
do.write_one_file('Ubmag_measures', ass)
#do.write_matlab(dbm, ass, 'results/Ubmag_measures.mat')
# collect the raw data :
bamber = DataFactory.get_bamber(thklim = thklim)
searise = DataFactory.get_searise(thklim = thklim)
#meas_shf = DataFactory.get_shift_gre_measures()
#dbv = DataInput("../results/", ("Ubmag_measures.mat", "Ubmag.mat"),
# gen_space=False)
dsr = DataInput(None, searise, gen_space=False)
dbm = DataInput(None, bamber, gen_space=False)
#dmss = DataInput(None, meas_shf, gen_space=False)
#dbv.set_data_min('Ubmag', 0.0, 0.0)
#dbv.set_data_max('Ubmag', 500.0, 500.0)
dsr.change_projection(dbm)
dsr.set_data_min('U_ob', 0.0, 0.0)
dsr.set_data_max('U_ob', 400.0, 400.0)
# might want to refine off of thickness :
#H = dbm.data['H'].copy().T
# ensure that there are no values less than 1 for taking log :
#vel = dbv.data['Ubmag'].copy().T
vel = dsr.data['U_ob'].copy().T
vel += 1
# invert the sections where the velocity is low to refine at divide :
data = log(vel)
mv = data.max()
k = 1
#data[2*data < k*mv] = -data[2*data < k*mv] + k*mv
measure = DataFactory.get_gre_measures()
bamber = DataFactory.get_bamber()
direc = os.path.dirname(os.path.realpath(__file__))
# load a mesh :
mesh = Mesh("./mesh.xml")
# create data objects to use with varglas :
dsr = DataInput(None, searise, mesh=mesh, create_proj=True)
dbam = DataInput(None, bamber, mesh=mesh)
dms = DataInput(None, measure, mesh=mesh, create_proj=True, flip=True)
dms.change_projection(dsr)
dbam.set_data_min('H', 10.0, 10.0)
dsr.set_data_min('U_ob',0.0,0.0)
dms.set_data_val('sp',-0.1,-2e9)
H = dbam.get_interpolation("H")
S = dbam.get_interpolation("h")
adot = dsr.get_interpolation("adot")
#Uobs = dms.get_interpolation("sp",kx=1,ky=1)
Uobs = dsr.get_interpolation("U_ob",kx=1,ky=1)
Uobs.vector()[Uobs.vector().array()<0] = 0.0
U_sar_spline = dms.get_spline_expression("sp",kx=1,ky=1)
insar_mask = CellFunctionSizet(mesh)
insar_mask.set_all(0)
for c in cells(mesh):
x,y = c.midpoint().x(),c.midpoint().y()
thklim = 200.0
measures = DataFactory.get_ant_measures(res=900)
bedmap1 = DataFactory.get_bedmap1(thklim=thklim)
bedmap2 = DataFactory.get_bedmap2(thklim=thklim)
mesh = MeshFactory.get_antarctica_coarse()
dm = DataInput(None, measures, mesh=mesh)
db1 = DataInput(None, bedmap1, mesh=mesh)
db2 = DataInput(None, bedmap2, mesh=mesh)
db2.set_data_val('H', 32767, thklim)
db2.set_data_val('S', 32767, 0.0)
dm.set_data_min('U_ob', 0.0, 0.0)
Thickness = db2.get_spline_expression("H")
Surface = db2.get_spline_expression("S")
Bed = db2.get_spline_expression("B")
Mask = db2.get_nearest_expression("mask")
SurfaceTemperature = db1.get_spline_expression("srfTemp")
BasalHeatFlux = db1.get_spline_expression("q_geo")
adot = db1.get_spline_expression("adot")
U_observed = dm.get_spline_expression("U_ob")
model = model.Model()
model.set_mesh(mesh)
model.set_geometry(Surface, Bed, deform=True)
model.set_parameters(pc.IceParameters())
model.initialize_variables()
bedmap1 = DataFactory.get_bedmap1(thklim=thklim)
bedmap2 = DataFactory.get_bedmap2(thklim=thklim)
mesh = Mesh('meshes/mesh_low.xml')
flat_mesh = Mesh('meshes/mesh_low.xml')
#mesh.coordinates()[:,2] /= 100000.0
#flat_mesh.coordinates()[:,2] /= 100000.0
dm = DataInput(None, measures, mesh=mesh)
db1 = DataInput(None, bedmap1, mesh=mesh)
db2 = DataInput(None, bedmap2, mesh=mesh)
db2.set_data_val('H', 32767, thklim)
db2.set_data_val('h', 32767, 0.0)
dm.set_data_min('v_mag', 0.0, 0.0)
#h = db2.get_projection('h')
#H = db2.get_projection('H')
#v_mag = dm.get_projection('v_mag')
#surfTemp = db1.get_projection("srfTemp")
#q_geo = db1.get_projection("q_geo")
#File('tests/q_geo.pvd') << q_geo
#File('tests/srfTemp.pvd') << surfTemp
#File('tests/hf.pvd') << h
#File('tests/Hf.pvd') << H
#File('tests/v_magf.pvd') << v_mag
Thickness = db2.get_spline_expression("H")
Surface = db2.get_spline_expression("h")
m = MeshGenerator(dbm, 'mesh', '')
m.create_contour('H', zero_cntr=200.0, skip_pts=2)
m.eliminate_intersections(dist=40)
#m.plot_contour()
m.write_gmsh_contour(boundary_extend=False)
m.extrude(h=100000, n_layers=10)
m.close_file()
#===============================================================================
# refine :
thklim = 1250.0
#dsr.set_data_min('U_ob', boundary=0.0, val=0.0)
#dsr.set_data_max('U_ob', boundary=400.0, val=400.0)
dbm.set_data_min('H', boundary=thklim, val=thklim)
#dbm.set_data_max('mask', 2, 0)
# might want to refine off of thickness :
H = dbm.data['H']
# ensure that there are no values less than 1 for taking log :
vel = dsr.data['U_ob']
vel += 1
vel = log(vel)
# plot to check :
#imshow(H[::-1,:])
#colorbar()
#show()
prb = VelocityBalance_2(mesh, H, S, adot, 12.0)
prb.solve_forward()
# File ouput
do = DataOutput('results/greenland_balance_velocity_v2/')
d_out = {
'U_bal_mag': prb.Ubmag,
'H': prb.H,
'adot': prb.adot,
'S': prb.S,
'slope': prb.slope,
'residual': prb.residual
}
do.write_dict_of_files(d_out)
do.write_dict_of_files(d_out, extension='.xml')
do.write_one_file('sp', dms.get_projection('sp'))
#do.write_matlab(dbm, prb.Ubmag, 'results/Ubmag.mat')
dbv = DataInput('results/', ('Ubmag.mat', ), mesh=mesh)
dbv.set_data_min('Ubmag', 0.0, 0.0)
ass = dbv.integrate_field('sp', dmss, 'Ubmag', val=50)
do.write_one_file('Ubmag_measures', ass)
#do.write_matlab(dbm, ass, 'results/Ubmag_measures.mat')
measure = DataFactory.get_gre_measures()
#bamber = DataFactory.get_bamber()
direc = os.path.dirname(os.path.realpath(__file__))
# load a mesh :
mesh = Mesh("../meshes/mesh.xml")
# create data objects to use with varglas :
dsr = DataInput(None, searise, mesh=mesh, create_proj=True)
#dbm = DataInput(None, bamber, mesh=mesh)
dms = DataInput(None, measure, mesh=mesh, create_proj=True, flip=True)
dms.change_projection(dsr)
dsr.set_data_min('H', 10.0, 10.0)
H = dsr.get_projection("H")
S = dsr.get_projection("h")
adot = dsr.get_projection("adot")
prb = VelocityBalance_2(mesh, H, S, adot, 12.0)
prb.solve_forward()
# File ouput
do = DataOutput('results/greenland_balance_velocity_v2/')
d_out = {'Ubmag' : prb.Ubmag,
'H' : prb.H,
'adot' : prb.adot,
'S' : prb.S,
from gmshpy import *
from scipy.interpolate import RectBivariateSpline
from src.utilities import DataInput
# ===============================================================================
# data preparation :
thklim = 200.0
# collect the raw data :
# measures = DataFactory.get_ant_measures()
# bedmap1 = DataFactory.get_bedmap1(thklim=thklim)
# bedmap2 = DataFactory.get_bedmap2(thklim=thklim)
dbv = DataInput("../results/", ("v_mag.mat",), gen_space=False)
dbv.set_data_min("v_mag", 0.0, 0.0)
dbv.set_data_max("v_mag", 400.0, 400.0)
# db2 = DataInput(None, bedmap2, gen_space=False)
# might want to refine off of thickness :
# H = db2.data['H'].copy().T
# ensure that there are no values less than 1 for taking log :
# vel = dsr.data['U_ob'].copy().T
vel = dbv.data["v_mag"].copy().T
vel += 1
# invert the sections where the velocity is low to refine at divide :
data = log(vel)
# mv = data.max()
measure = DataFactory.get_gre_measures()
bamber = DataFactory.get_bamber()
direc = os.path.dirname(os.path.realpath(__file__))
# load a mesh :
mesh = Mesh("./mesh.xml")
# create data objects to use with varglas :
dsr = DataInput(None, searise, mesh=mesh, create_proj=True)
dbam = DataInput(None, bamber, mesh=mesh)
dms = DataInput(None, measure, mesh=mesh, create_proj=True, flip=True)
dms.change_projection(dsr)
dbam.set_data_min("H", 200.0, 200.0)
dbam.set_data_min("h", 1.0, 1.0)
dms.set_data_min("sp", 0.0, -2e9)
H = dbam.get_projection("H")
H0 = dbam.get_projection("H")
S = dbam.get_projection("h")
adot = dsr.get_projection("adot")
Uobs = dms.get_projection("sp")
Uobs.vector()[Uobs.vector().array() < 0] = 0.0
U_sar_spline = dms.get_spline_expression("sp")
insar_mask = CellFunctionSizet(mesh)