Python apply_trans 예제들

예제 #1

파일: non_freesurfer_atlas.py 프로젝트: pelednoam/mmvt

def transform_to_another_subject(subject, region, subjects_dir):
    colin27_xfm = tu.get_talxfm('colin27', subjects_dir)
    xfm = tu.get_talxfm('colin27', subjects_dir)
    for hemi in ['lh', 'rh']:
        verts, faces = utils.read_ply_file(op.join(MMVT_DIR, 'colin27', 'subcortical', '{}_{}.ply'.format(region, hemi)))
        verts = tu.apply_trans(colin27_xfm, verts)
        verts = tu.apply_trans(np.linalg.inv(xfm), verts)
        utils.write_ply_file(verts, faces, op.join(MMVT_DIR, subject, 'subcortical', '{}_{}.ply'.format(region, hemi)))

예제 #2

파일: non_freesurfer_atlas.py 프로젝트: keshava/mmvt

def transform_to_another_subject(subject, region, subjects_dir):
    colin27_xfm = tu.get_talxfm('colin27', subjects_dir)
    xfm = tu.get_talxfm('colin27', subjects_dir)
    for hemi in ['lh', 'rh']:
        verts, faces = utils.read_ply_file(op.join(MMVT_DIR, 'colin27', 'subcortical', '{}_{}.ply'.format(region, hemi)))
        verts = tu.apply_trans(colin27_xfm, verts)
        verts = tu.apply_trans(np.linalg.inv(xfm), verts)
        utils.write_ply_file(verts, faces, op.join(MMVT_DIR, subject, 'subcortical', '{}_{}.ply'.format(region, hemi)))

예제 #3

파일: non_freesurfer_atlas.py 프로젝트: Bakikii/blender-importer

def convert_to_ply(srf_fname, ply_fname, org_vox2ras_tkr, shifter_vox2tk_ras):
    verts, faces, verts_num, faces_num = utils.read_srf_file(srf_fname)
    verts = tu.apply_trans(np.linalg.inv(org_vox2ras_tkr), verts)
    verts = tu.apply_trans(shifter_vox2tk_ras, verts)
    utils.write_ply_file(verts, faces, ply_fname)

예제 #4

파일: non_freesurfer_atlas.py 프로젝트: Bakikii/blender-importer

def to_ras(points, org_vox2ras_tkr, shifter_vox2tk_ras):
    points = tu.apply_trans(np.linalg.inv(org_vox2ras_tkr), points)
    points = tu.apply_trans(shifter_vox2tk_ras, points)
    return points

예제 #5

파일: non_freesurfer_atlas.py 프로젝트: pelednoam/mmvt

def convert_to_ply(srf_fname, ply_fname, org_vox2ras_tkr, shifter_vox2tk_ras):
    verts, faces, verts_num, faces_num = utils.read_srf_file(srf_fname)
    verts = tu.apply_trans(np.linalg.inv(org_vox2ras_tkr), verts)
    verts = tu.apply_trans(shifter_vox2tk_ras, verts)
    utils.write_ply_file(verts, faces, ply_fname)

예제 #6

파일: non_freesurfer_atlas.py 프로젝트: pelednoam/mmvt

def to_ras(points, org_vox2ras_tkr, shifter_vox2tk_ras):
    points = tu.apply_trans(np.linalg.inv(org_vox2ras_tkr), points)
    points = tu.apply_trans(shifter_vox2tk_ras, points)
    return points