def compile_gsea():
#
os.chdir('gsea')
subpcall('make', shell=True)
rev = subpcall('../bin/mageckGSEA', shell=True)
os.chdir('../')
return rev
def compile_rra():
#
os.chdir('rra')
subpcall('make', shell=True)
rev = subpcall('../bin/RRA', shell=True)
os.chdir('../')
return rev
def compile_rra():
#
os.chdir('rra');
subpcall('make',shell=True);
rev=subpcall('../bin/RRA',shell=True);
os.chdir('../');
return rev;
def run_cmd(command):
"""
Run a command and save the command's string to the log file
@type command: str
@param command: the command you want to run, for example, "ls -l"
"""
info("Run: %s" % command)
subpcall(command, shell=True)
return
def run_cmd(command):
subpcall (command, shell = True)
def run_cmd(command):
Info(command)
subpcall(command, shell=True)
def run_cmd(command):
info("Run: %s" % command)
subpcall(command, shell=True)
return
def run_cmd ( command ):
info ("Run: %s" % command)
subpcall (command,shell=True)
return