class TestFCNetProteinStructure(unittest.TestCase):
def setUp(self):
self.b = FCNetProteinStructureBenchmark(
data_dir="./fcnet_tabular_benchmarks/")
def test_random_sampling(self):
config = self.b.get_configuration_space().sample_configuration()
self.b.objective_function(config)
b = FCNetSliceLocalizationBenchmark(data_dir=data_dir)
elif benchmark_type == "naval_propulsion": # NAS-HPO-Bench
max_budget = 100
b = FCNetNavalPropulsionBenchmark(data_dir=data_dir)
else: # benchmark_type == "parkinsons_telemonitoring": # NAS-HPO-Bench
max_budget = 100
b = FCNetParkinsonsTelemonitoringBenchmark(data_dir=data_dir)
def f(config, budget=None):
if budget is not None:
fitness, cost = b.objective_function(config, budget=int(budget))
else:
fitness, cost = b.objective_function(config)
return fitness, cost
cs = b.get_configuration_space()
dimensions = len(cs.get_hyperparameters())
elif benchmark == '1shot1':
assert benchmark_type in ['1', '2', '3']
sys.path.append(os.path.join(os.getcwd(), '../nasbench/'))
sys.path.append(os.path.join(os.getcwd(), '../nasbench-1shot1/'))
from nasbench import api
from nasbench_analysis.search_spaces.search_space_1 import SearchSpace1
from nasbench_analysis.search_spaces.search_space_2 import SearchSpace2
from nasbench_analysis.search_spaces.search_space_3 import SearchSpace3
nasbench = api.NASBench(
os.path.join(
os.getcwd(), "../nasbench-1shot1/nasbench_analysis/"