def run_example(self, a_str, p_str):
# execute
tmpdir = tempfile.mkdtemp()
try:
run_case(call_file=os.path.realpath(__file__),
antimony_str=a_str,
phrasedml_str=p_str,
working_dir=tmpdir)
finally:
shutil.rmtree(tmpdir)
def run_example(self, a_str, p_str):
# execute
tmpdir = tempfile.mkdtemp()
try:
run_case(
call_file=os.path.realpath(__file__),
antimony_str=a_str,
phrasedml_str=p_str,
working_dir=tmpdir
)
finally:
shutil.rmtree(tmpdir)
""" Coupled ranges. Two ranges with one of the ranges being master range, the other following in lock. """ import os from tellurium.sedml.utils import run_case a_str = ''' model case_06() J0: S1 -> S2; k1*S1-k2*S2 S1 = 10.0; S2 = 0.0; k1 = 0.5; k2=0.4 end ''' p_str = ''' mod1 = model "case_06" sim1 = simulate uniform(0, 10, 100) task1 = run sim1 on mod1 repeat1 = repeat task1 for S1 in [1, 3, 5], S2 in uniform(0, 10, 2), reset=True repeat2 = repeat task1 for S1 in [1, 3, 5], S2 in uniform(0, 10, 2), reset=False plot "Example plot" repeat1.time vs repeat1.S1, repeat1.S2 report repeat1.time vs repeat1.S1, repeat1.S2 plot "Example plot" repeat2.time vs repeat2.S1, repeat2.S2 report repeat2.time vs repeat2.S1, repeat2.S2 ''' run_case(os.path.realpath(__file__), a_str, p_str)
