def __process_change_owner(self, new_owner):
trac_tool = None
if new_owner is None:
# Reassign to requester for editing the experiment
# metadata.
trac_tool = IsoRequestTicketReassigner(
iso_request=self.get_entity(),
completed=False)
new_owner = ''
elif new_owner == self.requester.directory_user_id:
# Close iso request and reassign to requester.
trac_tool = IsoRequestTicketReassigner(
iso_request=self.get_entity(),
completed=True)
elif new_owner == STOCKMANAGEMENT_USER:
if self.owner == '':
# Activate this ISO request for the first time.
trac_tool = IsoRequestTicketAccepter(
iso_request=self.get_entity(),
username=new_owner)
else:
user_id = get_current_user().directory_user_id
new_owner = user_id + ", " + STOCKMANAGEMENT_USER
trac_tool = IsoRequestTicketReopener(
iso_request=self.get_entity(),
username=user_id)
else:
# Accept this ISO request.
tkt_user = new_owner.split(',')[0]
trac_tool = IsoRequestTicketAccepter(
iso_request=self.get_entity(),
username=tkt_user)
if not trac_tool is None:
run_trac_tool(trac_tool)
self.owner = new_owner
def __pipetting_iso_or_iso_job(self, iso_or_iso_job):
user = get_current_user()
executor = get_worklist_executor(iso_or_iso_job, user)
result = run_tool(executor, error_prefix='Errors during pipetting. --')
trac_updater = LabIsoStockTransferReporter(executor=executor)
run_trac_tool(trac_updater)
return result
def _process_request_data(self, data):
initial_name = self.context.__name__
self.context.update(data)
if isinstance(data, ExperimentMetadata):
# Now that we have all new information, generate links and upload
# to Trac.
url = self.request.application_url + '/public//LOUICe.html#' \
+ self.context.path
if self.context.iso_request is None:
iso_url = "No ISO for this experiment metadata."
else:
iso_url = self.request.application_url \
+ '/public//LOUICe.html#' \
+ self.context.iso_request.path
trac_tool = ExperimentMetadataReportUploader(
generator=self.__generator,
experiment_metadata_link=url,
iso_request_link=iso_url)
run_trac_tool(trac_tool)
# FIXME: add conflict detection # pylint: disable=W0511
if initial_name != self.context.__name__:
self.request.response_headerlist = \
[('Location',
resource_to_url(self.context, request=self.request))]
self.request.response_status = self._status(HTTPOk)
return {'context' : self.context}
def __process_change_owner(self, new_owner):
trac_tool = None
if new_owner is None:
# Reassign to requester for editing the experiment
# metadata.
trac_tool = IsoRequestTicketReassigner(
iso_request=self.get_entity(), completed=False)
new_owner = ''
elif new_owner == self.requester.directory_user_id:
# Close iso request and reassign to requester.
trac_tool = IsoRequestTicketReassigner(
iso_request=self.get_entity(), completed=True)
elif new_owner == STOCKMANAGEMENT_USER:
if self.owner == '':
# Activate this ISO request for the first time.
trac_tool = IsoRequestTicketAccepter(
iso_request=self.get_entity(), username=new_owner)
else:
user_id = get_current_user().directory_user_id
new_owner = user_id + ", " + STOCKMANAGEMENT_USER
trac_tool = IsoRequestTicketReopener(
iso_request=self.get_entity(), username=user_id)
else:
# Accept this ISO request.
tkt_user = new_owner.split(',')[0]
trac_tool = IsoRequestTicketAccepter(iso_request=self.get_entity(),
username=tkt_user)
if not trac_tool is None:
run_trac_tool(trac_tool)
self.owner = new_owner
def __pipetting_iso_or_iso_job(self, iso_or_iso_job):
user = get_current_user()
executor = get_worklist_executor(iso_or_iso_job, user)
result = run_tool(executor,
error_prefix='Errors during pipetting. --')
trac_updater = LabIsoStockTransferReporter(executor=executor)
run_trac_tool(trac_updater)
return result
