def build_tree(node):
if node.is_terminal():
return TreeLeaf(get_idx(node.name))
else:
children = map(build_tree, node.clades)
node = TreeNode()
for child in children:
node.add_child(child)
return node
def build_tree(node):
if node.is_terminal():
return TreeLeaf(get_idx(node.name))
else:
children = map(build_tree, node.clades)
node = TreeNode()
for child in children:
node.add_child(child)
return node
from trees.util import plot_tree
from trees import Tree, TreeNode, TreeLeaf
import matplotlib.pyplot as plt
if __name__ == "__main__":
leaf1 = TreeLeaf(1)
leaf2 = TreeLeaf(2)
leaf3 = TreeLeaf(3)
node1 = TreeNode()
node1.add_child(leaf1)
node1.add_child(leaf2)
node2 = TreeNode()
node2.add_child(node1)
node2.add_child(leaf3)
tree = Tree(node2)
plot_tree(tree)
plt.show()
p = leaf1.detach()
plot_tree(tree)
plt.show()
leaf3.attach(p)
plot_tree(tree)
plt.show()
def build_location_tree():
root = TreeNode('Global')
usa = TreeNode('USA')
chl = TreeNode('Chile')
# Build New jersie tree
nej = TreeNode('New Jersie')
nej.add_child(TreeNode('Princeton'))
nej.add_child(TreeNode('Treton'))
# Build california tree
cal = TreeNode('California')
cal.add_child(TreeNode('San Francisco'))
cal.add_child(TreeNode('Mountain view'))
cal.add_child(TreeNode('Palo Alto'))
# Finish usa tree
usa.add_child(nej)
usa.add_child(cal)
# Build Region Metropolitana region
rm = TreeNode('Region Metropolitana')
rm.add_child(TreeNode('Santiago'))
rm.add_child(TreeNode('Maipu'))
# Build Punta Arenas tree
mas = TreeNode('Magallanes')
mas.add_child(TreeNode('Punta Arenas'))
mas.add_child(TreeNode('Puerto Natales'))
# Finish Chile Tree
chl.add_child(rm)
chl.add_child(mas)
# Finish all tree
root.add_child(chl)
root.add_child(usa)
return root