def __init__(self):
super(TestSQLiteProfile, self).__init__()
self.web.RENDER_HTML = False
self.MAX_THREADS_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_THREAD_NR, 2, int)
self.TVB_STORAGE = self.manager.get_attribute(stored.KEY_STORAGE,
self.DEFAULT_STORAGE,
str)
# For tests we will place logs in workspace (current folder), to have them visible from Hudson.
self.TVB_LOG_FOLDER = "TEST_OUTPUT"
self.TVB_TEMP_FOLDER = os.path.join(self.TVB_STORAGE, "TEMP")
self.db = DBSettings(self.manager, self.DEFAULT_STORAGE,
self.TVB_STORAGE)
self.db.DB_URL = 'sqlite:///' + os.path.join(self.TVB_STORAGE,
"tvb-database.db")
self.db.SELECTED_DB = 'sqlite'
self.hpc.CRYPT_DATADIR = self.manager.get_attribute(
stored.KEY_CRYPT_DATADIR, os.path.join(self.TVB_STORAGE, '.data'))
self.hpc.CRYPT_PASSDIR = self.manager.get_attribute(
stored.KEY_CRYPT_PASSDIR, os.path.join(self.TVB_STORAGE, '.pass'))
self.file_storage = self.manager.get_attribute(stored.KEY_FILE_STORAGE,
'h5')
def __init__(self):
self.manager = stored.SettingsManager(self.TVB_CONFIG_FILE)
# Actual storage of all TVB related files
self.KEYCLOAK_CONFIG = self.manager.get_attribute(
stored.KEY_KC_CONFIGURATION, '')
self.KEYCLOAK_LOGIN_ENABLED = self.manager.get_attribute(
stored.KEY_ENABLE_KC_LOGIN, False, eval)
self.KEYCLOAK_WEB_CONFIG = self.manager.get_attribute(
stored.KEY_KC_WEB_CONFIGURATION, '')
self.TVB_STORAGE = self.manager.get_attribute(stored.KEY_STORAGE,
self.FIRST_RUN_STORAGE,
str)
self.UPLOAD_KEY_PATH = self.manager.get_attribute(
stored.KEY_UPLOAD_PRIVATE_KEY_PATH, None, str)
self.TRACE_USER_ACTIONS = self.manager.get_attribute(
stored.KEY_TRACE_USER_ACTIONS, False, eval)
self.TVB_LOG_FOLDER = os.path.join(self.TVB_STORAGE, "logs")
self.TVB_TEMP_FOLDER = os.path.join(self.TVB_STORAGE, "TEMP")
self.env = Environment()
self.cluster = ClusterSettings(self.manager)
self.hpc = HPCSettings(self.manager)
self.web = WebSettings(self.manager)
self.db = DBSettings(self.manager, self.DEFAULT_STORAGE,
self.TVB_STORAGE)
self.version = VersionSettings(self.manager, self.BIN_FOLDER)
self.file_storage = self.manager.get_attribute(stored.KEY_FILE_STORAGE,
'h5', str)
self.EXTERNALS_FOLDER_PARENT = os.path.dirname(self.BIN_FOLDER)
if not self.env.is_distribution():
self.EXTERNALS_FOLDER_PARENT = os.path.dirname(
self.EXTERNALS_FOLDER_PARENT)
# The path to the matlab executable (if existent). Otherwise just return an empty string.
value = self.manager.get_attribute(stored.KEY_MATLAB_EXECUTABLE, '',
str) or ''
if value == 'None':
value = ''
self.MATLAB_EXECUTABLE = value
# Maximum number of vertices acceptable o be part of a surface at import time.
self.MAX_SURFACE_VERTICES_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_NR_SURFACE_VERTEX, 300000, int)
# Max number of ops that can be scheduled from UI in a PSE. To be correlated with the oarsub limitations
self.MAX_RANGE_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_RANGE_NR, 2000, int)
# Max number of threads in the pool of ops running in parallel. TO be correlated with CPU cores
self.MAX_THREADS_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_THREAD_NR, 4, int)
self.OPERATIONS_BACKGROUND_JOB_INTERVAL = self.manager.get_attribute(
stored.KEY_OP_BACKGROUND_INTERVAL, 60, int)
# The maximum disk space that can be used by one single user, in KB.
self.MAX_DISK_SPACE = self.manager.get_attribute(
stored.KEY_MAX_DISK_SPACE_USR, 5 * 1024 * 1024, int)
def __init__(self):
super(TestSQLiteProfile, self).__init__()
self.web.RENDER_HTML = False
self.MAX_THREADS_NUMBER = self.manager.get_attribute(stored.KEY_MAX_THREAD_NR, 2, int)
self.TVB_STORAGE = self.manager.get_attribute(stored.KEY_STORAGE, self.DEFAULT_STORAGE, unicode)
# For tests we will place logs in workspace, to have them visible from Hudson.
self.TVB_LOG_FOLDER = os.path.join(self.BIN_FOLDER, "TEST_OUTPUT")
self.TVB_TEMP_FOLDER = os.path.join(self.TVB_STORAGE, "TEMP")
self.db = DBSettings(self.manager, self.DEFAULT_STORAGE, self.TVB_STORAGE)
self.db.DB_URL = 'sqlite:///' + os.path.join(self.TVB_STORAGE, "tvb-database.db")
self.db.SELECTED_DB = 'sqlite'
def __init__(self, web_enabled=True):
self.manager = stored.SettingsManager(self.TVB_CONFIG_FILE)
## Actual storage of all TVB related files
self.TVB_STORAGE = self.manager.get_attribute(stored.KEY_STORAGE,
self.FIRST_RUN_STORAGE,
unicode)
self.TVB_LOG_FOLDER = os.path.join(self.TVB_STORAGE, "logs")
self.TVB_TEMP_FOLDER = os.path.join(self.TVB_STORAGE, "TEMP")
self.TVB_PATH = self.manager.get_attribute(stored.KEY_TVB_PATH, '')
self.env = Environment()
self.cluster = ClusterSettings(self.manager)
self.web = WebSettings(self.manager, web_enabled)
self.db = DBSettings(self.manager, self.DEFAULT_STORAGE,
self.TVB_STORAGE)
self.version = VersionSettings(self.manager, self.BIN_FOLDER)
self.EXTERNALS_FOLDER_PARENT = os.path.dirname(self.BIN_FOLDER)
if not self.env.is_distribution():
self.EXTERNALS_FOLDER_PARENT = os.path.dirname(
self.EXTERNALS_FOLDER_PARENT)
# The path to the matlab executable (if existent). Otherwise just return an empty string.
value = self.manager.get_attribute(stored.KEY_MATLAB_EXECUTABLE, '',
str) or ''
if value == 'None':
value = ''
self.MATLAB_EXECUTABLE = value
# Maximum number of vertices acceptable o be part of a surface at import time.
self.MAX_SURFACE_VERTICES_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_NR_SURFACE_VERTEX, 300000, int)
# Max number of ops that can be scheduled from UI in a PSE. To be correlated with the oarsub limitations
self.MAX_RANGE_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_RANGE_NR, 2000, int)
# Max number of threads in the pool of ops running in parallel. TO be correlated with CPU cores
self.MAX_THREADS_NUMBER = self.manager.get_attribute(
stored.KEY_MAX_THREAD_NR, 4, int)
# The maximum disk space that can be used by one single user, in KB.
self.MAX_DISK_SPACE = self.manager.get_attribute(
stored.KEY_MAX_DISK_SPACE_USR, 5 * 1024 * 1024, int)
## Configure Traits
self.TRAITS_CONFIGURATION = EnhancedDictionary()
self.TRAITS_CONFIGURATION.interface_method_name = 'interface'
self.TRAITS_CONFIGURATION.use_storage = True