def test_HI_transition(): sheet = Sheet.planar_sheet_3d("sheet", 5, 5, 1, 1) sheet.sanitize() datasets = extrude(sheet.datasets, method="translation") eptm = Monolayer("test_HIt", datasets, bulk_spec()) BulkGeometry.update_all(eptm) Nc, Nf, Ne, Nv = eptm.Nc, eptm.Nf, eptm.Ne, eptm.Nv eptm.settings["threshold_length"] = 1e-3 IH_transition(eptm, 26) BulkGeometry.update_all(eptm) face = eptm.face_df.index[-1] HI_transition(eptm, face) assert eptm.Nc == Nc assert eptm.Nf == Nf assert eptm.Ne == Ne assert eptm.Nv == Nv invalid = eptm.get_invalid() assert np.alltrue(1 - invalid) assert np.alltrue(eptm.edge_df["sub_vol"] > 0)
def test_IH_transition(): sheet = Sheet.planar_sheet_3d("sheet", 5, 5, 1, 1) sheet.sanitize() datasets = extrude(sheet.datasets, method="translation") eptm = Monolayer("test_IHt", datasets, bulk_spec()) BulkGeometry.update_all(eptm) Nc, Nf, Ne, Nv = eptm.Nc, eptm.Nf, eptm.Ne, eptm.Nv eptm.settings["threshold_length"] = 1e-3 IH_transition(eptm, 26) BulkGeometry.update_all(eptm) assert eptm.Nc == Nc assert eptm.Nf == Nf + 2 assert eptm.Ne == Ne + 12 assert eptm.Nv == Nv + 1 invalid = eptm.get_invalid() assert np.alltrue(1 - invalid) assert np.alltrue(eptm.edge_df["sub_vol"] > 0) assert ( eptm.face_df[eptm.face_df.segment == "apical"].shape[0] == eptm.cell_df.shape[0] )