def test_fivetimes_dataset(self):
X = util.file_to_whitespace_separated_matrix('fivetimes2.txt')
# this file was generated transposed; oops
X = X.T
# build the tree
print X.shape
root = build_tree(X)
for node in root.preorder():
if node.has_label():
node.label += 1
print
print root.get_newick_string()
print
def test_kh_dataset(self):
X = util.file_to_whitespace_separated_matrix('kh-dataset.txt')
root = build_tree(X)