def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing visualization.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new visualization",
"help_text": """
Create a custom-visualization.
Generally, you will select a subset of available data on the
"Data" tab, then will customize the visualization using the
"Settings" tab. To view a preview of the visual at any time,
select the "Preview" tab.
""",
"cancel_url": self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "visualForm"
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing data-pivot.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new data-pivot",
"help_text": """
Create a custom-visualization for this assessment.
Generally, you will select a subset of available data, then
customize the visualization the next-page.
""",
"cancel_url": self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "dataPivotForm"
return helper
def setHelper(self):
self.fields['description'].widget.attrs['rows'] = 4
for fld in list(self.fields.keys()):
self.fields[fld].widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update dosing regime",
"help_text": "Update an existing dosing-regime.",
"cancel_url": self.instance.dosed_animals.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new dosing-regime",
"help_text": """
Create a new dosing-regime. Each dosing-regime is one
protocol for how animals were dosed. Multiple different
dose-metrics can be associated with one dosing regime. If
this is a generational-experiment, you may not need to create
a new dosing-regime, but could instead specify the dosing
regime of parents or other ancestors.""",
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "dosing_regime"
helper.add_fluid_row('route_of_exposure', 3, "span4")
helper.add_fluid_row('num_dose_groups', 3, "span4")
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing data-pivot.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text":
"Create new data-pivot",
"help_text":
"""
Create a custom-visualization for this assessment.
Generally, you will select a subset of available data, then
customize the visualization the next-page.
""",
"cancel_url":
self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "dataPivotForm"
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing visualization.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text":
"Create new visualization",
"help_text":
"""
Create a custom-visualization.
Generally, you will select a subset of available data on the
"Data" tab, then will customize the visualization using the
"Settings" tab. To view a preview of the visual at any time,
select the "Preview" tab.
""",
"cancel_url":
self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "visualForm"
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new endpoint",
"help_text": """
Create a new endpoint. An endpoint should describe
one measure-of-effect which was measured in the study.
It may or may not contain quantitative data. For
endpoint terminology, use the reference document
"<a href="https://hawcprd.epa.gov/assessment/100000039/">Recommended
Terminology for Outcomes/Endpoints</a>."
""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["effects"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 4, "span3")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('observation_time', 3, "span4")
helper.add_fluid_row('data_reported', 3, "span4")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('response_units', 3, "span4")
helper.add_fluid_row('NOEL', 4, "span3")
helper.add_fluid_row('statistical_test', 3,
["span6", "span3", "span3"])
helper.add_fluid_row('litter_effects', 2, "span6")
url = reverse('assessment:effect_tag_create',
kwargs={'pk': self.instance.assessment.pk})
helper.addBtnLayout(helper.layout[4], 0, url, "Add new effect tag",
"span6")
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if fld in ["species", "strain"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing animal-group.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new animal-group",
"help_text": """
Create a new animal-group. Each animal-group is a set of
animals which are comparable for a given experiment. For
example, they may be a group of F1 rats. Animal-groups may
have different exposures or doses, but should be otherwise
comparable.""",
"cancel_url": self.instance.experiment.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "animal_group"
helper.add_fluid_row('species', 3, "span4")
helper.add_fluid_row('lifestage_exposed', 2, "span6")
assessment_id = self.instance.experiment.study.assessment.pk
url = reverse('assessment:species_create',
kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 0, url, "Add new species",
"span4")
url = reverse('assessment:strain_create', kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 1, url, "Add new strain",
"span4")
if "generation" in self.fields:
helper.add_fluid_row('siblings', 3, "span4")
helper.add_fluid_row('comments', 2, "span6")
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new endpoint",
"help_text": """
Create a new endpoint. An endpoint may should describe one
measure-of-effect which was measured in the study. It may
or may not contain quantitative data.""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["effects"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 4, "span3")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('observation_time', 3, "span4")
helper.add_fluid_row('data_reported', 3, "span4")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('response_units', 3, "span4")
helper.add_fluid_row('NOEL', 4, "span3")
helper.add_fluid_row('statistical_test', 3, ["span6", "span3", "span3"])
url = reverse('assessment:effect_tag_create', kwargs={'pk': self.instance.assessment.pk})
helper.addBtnLayout(helper.layout[4], 0, url, "Add new effect tag", "span6")
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new endpoint",
"help_text": u"""
Create a new endpoint. An endpoint may should describe one
measure-of-effect which was measured in the study. It may
or may not contain quantitative data.""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
helper.add_adder("addEffectTag",
"Add new effect tag",
'{% url "assessment:effect_tag_create" assessment.pk %}')
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 3, "span4")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('observation_time', 2, "span6")
helper.add_fluid_row('data_reported', 4, "span4")
helper.add_fluid_row('response_units', 2, "span6")
helper.add_fluid_row('NOEL', 3, "span4")
helper.add_fluid_row('monotonicity', 3, ["span2", "span5", "span5"])
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new endpoint",
"help_text": u"""
Create a new endpoint. An endpoint may should describe one
measure-of-effect which was measured in the study. It may
or may not contain quantitative data.""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
helper.add_adder(
"addEffectTag", "Add new effect tag",
'{% url "assessment:effect_tag_create" assessment.pk %}')
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 4, "span3")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('observation_time', 2, "span6")
helper.add_fluid_row('data_reported', 4, "span4")
helper.add_fluid_row('response_units', 2, "span6")
helper.add_fluid_row('NOEL', 3, "span4")
helper.add_fluid_row('monotonicity', 3, ["span2", "span5", "span5"])
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if fld in ["species", "strain"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing animal-group.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new animal-group",
"help_text": """
Create a new animal-group. Each animal-group is a set of
animals which are comparable for a given experiment. For
example, they may be a group of F1 rats. Animal-groups may
have different exposures or doses, but should be otherwise
comparable.""",
"cancel_url": self.instance.experiment.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "animal_group"
helper.add_fluid_row('species', 3, "span4")
helper.add_fluid_row('lifestage_exposed', 3, "span4")
assessment_id = self.instance.experiment.study.assessment.pk
url = reverse('assessment:species_create', kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 0, url, "Add new species", "span4")
url = reverse('assessment:strain_create', kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 1, url, "Add new strain", "span4")
if "generation" in self.fields:
helper.add_fluid_row('siblings', 3, "span4")
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if fld in ["species", "strain"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing animal-group.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new animal-group",
"help_text": u"""
Create a new animal-group. Each animal-group is a set of
animals which are comparable for a given experiment. For
example, they may be a group of F1 rats. Animal-groups may
have different exposures or doses, but should be otherwise
comparable.""",
"cancel_url": self.instance.experiment.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "animal_group"
helper.add_adder(
"addSpecies", "Add new species",
'{% url "assessment:species_create" assessment.pk %}')
helper.add_adder("addStrain", "Add new strain",
'{% url "assessment:strain_create" assessment.pk %}')
helper.add_fluid_row('species', 3, "span4")
helper.add_fluid_row('lifestage_exposed', 3, "span4")
if "generation" in self.fields:
helper.add_fluid_row('siblings', 3, "span4")
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if fld in ["species", "strain"]:
widget.attrs["class"] = "span10"
else:
widget.attrs["class"] = "span12"
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing animal-group.",
"cancel_url": self.instance.get_absolute_url(),
}
else:
inputs = {
"legend_text": u"Create new animal-group",
"help_text": u"""
Create a new animal-group. Each animal-group is a set of
animals which are comparable for a given experiment. For
example, they may be a group of F1 rats. Animal-groups may
have different exposures or doses, but should be otherwise
comparable.""",
"cancel_url": self.instance.experiment.get_absolute_url(),
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "animal_group"
helper.add_adder("addSpecies", "Add new species", '{% url "assessment:species_create" assessment.pk %}')
helper.add_adder("addStrain", "Add new strain", '{% url "assessment:strain_create" assessment.pk %}')
helper.add_fluid_row("species", 3, "span4")
helper.add_fluid_row("lifestage_exposed", 3, "span4")
if "generation" in self.fields:
helper.add_fluid_row("siblings", 3, "span4")
return helper