def _getLevel1File(self):
warnings.resetwarnings()
warnings.filterwarnings("ignore", category=UserWarning, append=True)
header = pf.open(self.sci_names[0], ignore_missing_end=True)[0].header
basename = helpers.getBaseName(header)
filename = basename + "_files.json"
return filename
def _getLevel1File(self):
warnings.resetwarnings()
warnings.filterwarnings('ignore', category=UserWarning, append=True)
header = pf.open(self.sci_names[0],ignore_missing_end=True)[0].header
basename = helpers.getBaseName(header)
filename = basename+'_files.json'
return filename
def write_spec(self, filename=None, path='.'):
c1 = fits.Column(name='wave', format='E', array=self.wave)
c2 = fits.Column(name='flux', format='E', array=self.flux)
c3 = fits.Column(name='uflux', format='E', array=self.uflux)
coldefs = fits.ColDefs([c1,c2,c3])
tbhdu = fits.BinTableHDU.from_columns(coldefs)
hdu = fits.PrimaryHDU(header=self.header)
thdulist = fits.HDUList([hdu,tbhdu])
if filename is None:
basename = helpers.getBaseName(self.header)
filename = path+'/'+basename+'_combspec.fits'
thdulist.writeto(filename,clobber=True)
return filename
def writeSpec(self, filename=None, path='.',order=1):
c1 = pf.Column(name='wave', format='D', array=self.wave)
c2 = pf.Column(name='flux', format='D', array=self.flux)
c3 = pf.Column(name='uflux', format='D', array=self.uflux)
coldefs = pf.ColDefs([c1,c2,c3])
tbhdu = pf.BinTableHDU.from_columns(coldefs)
hdu = pf.PrimaryHDU(header=self.header)
thdulist = pf.HDUList([hdu,tbhdu])
if filename is None:
basename = helpers.getBaseName(self.header)
filename = path+'/'+basename+'_calspec'+str(order)+'.fits'
thdulist.writeto(filename,clobber=True)
return filename
def write_spec(self, filename=None, path='.'):
c1 = fits.Column(name='wave', format='E', array=self.wave)
c2 = fits.Column(name='flux', format='E', array=self.flux)
c3 = fits.Column(name='uflux', format='E', array=self.uflux)
c4 = fits.Column(name='sky_sci', format='E', array=self.sky_sci)
c5 = fits.Column(name='sky_std', format='E', array=self.sky_std)
c6 = fits.Column(name='sky_model', format='E', array=self.sky_model)
coldefs = fits.ColDefs([c1, c2, c3, c4, c5, c6])
tbhdu = fits.BinTableHDU.from_columns(coldefs)
hdu = fits.PrimaryHDU(header=self.header)
thdulist = fits.HDUList([hdu, tbhdu])
if filename is None:
basename = helpers.getBaseName(self.header)
filename = path + '/' + basename + '_combspec.fits'
thdulist.writeto(filename, overwrite=True)
return filename
def writeSpec(self, filename=None, path='.', order=1):
c1 = pf.Column(name='wave', format='D', array=self.wave)
c2 = pf.Column(name='flux', format='D', array=self.flux)
c3 = pf.Column(name='uflux', format='D', array=self.uflux)
c4 = pf.Column(name='sky_sci', format='D', array=self.sky_sci)
c5 = pf.Column(name='sky_std', format='D', array=self.sky_std)
coldefs = pf.ColDefs([c1, c2, c3, c4, c5])
tbhdu = pf.BinTableHDU.from_columns(coldefs)
hdu = pf.PrimaryHDU(header=self.header)
thdulist = pf.HDUList([hdu, tbhdu])
if filename is None:
basename = helpers.getBaseName(self.header)
filename = path + '/' + basename + '_calspec' + str(
order) + '.fits'
thdulist.writeto(filename, clobber=True)
return filename