def no_args():
species2dict = {}
for g in GENOMES:
d = utils.get_seq2count_dict('results/elmdict_'
+ g + '.txt',
float(0))
entropy = utils.get_species_entropy(d)
with open(os.path.join(RESULTSDIR, g + '.elm_entropy'), 'w') as f:
for elm in entropy:
f.write(elm + '\t' + str(entropy[elm]) + '\n')
for flu in FLU_NAMES:
d = utils.get_seq2count_dict('results/flu_elmdict_'
+ flu,
float(0))
entropy = utils.get_species_entropy(d)
with open(os.path.join(RESULTSDIR, 'flu_' + flu + '.elm_entropy'), 'w') as f:
for elm in entropy:
f.write(elm + '\t' + str(entropy[elm]) + '\n')
def one_arg(afile):
d = utils.get_seq2count_dict(afile, float(0))
entropy = utils.get_species_entropy(d)
for elm in entropy:
print elm + '\t' + str(entropy[elm])