def _propose_df(self):
regex_1 = (
r"COVID-19 Vaccination Update:\n\n1st and second dose — (([a-zA-Z]+) (\d{1,2})(?:th|nd|rd|st) (202\d)), in 36 States \+ the FCT\. \n\n([0-9,]+) eligible "
r"Nigerians have been vaccinated with first dose while ([0-9,]+) of Nigerians vaccinated with 1st dose have collected their 2nd dose\."
)
regex_2 = r"COVID-19 Vaccination Update for (([a-zA-Z]+) (\d{1,2})(?:th|nd|rd|st),? (202\d)), in 36 States \+ the FCT\. "
regex_3 = r"COVID-19 Vaccination Update"
data = []
for tweet in self.tweets:
match_1 = re.search(regex_1, tweet.full_text)
match_2 = re.search(regex_2, tweet.full_text)
match_3 = re.search(regex_3, tweet.full_text)
if match_1:
people_vaccinated = clean_count(match_1.group(5))
people_fully_vaccinated = clean_count(match_1.group(6))
dt = clean_date(" ".join(match_1.group(2, 3, 4)), "%B %d %Y")
if self.stop_search(dt):
break
data.append({
"date":
dt,
"total_vaccinations":
people_vaccinated + people_fully_vaccinated,
"people_vaccinated":
people_vaccinated,
"people_fully_vaccinated":
people_fully_vaccinated,
"text":
tweet.full_text,
"source_url":
self.build_post_url(tweet.id),
"media_url":
tweet.extended_entities["media"][0]["media_url_https"],
})
elif match_2:
dt = clean_date(" ".join(match_2.group(2, 3, 4)), "%B %d %Y")
if self.stop_search(dt):
break
data.append({
"date":
dt,
"text":
tweet.full_text,
"source_url":
self.build_post_url(tweet.id),
"media_url":
tweet.extended_entities["media"][0]["media_url_https"],
})
elif match_3:
data.append({
"text":
tweet.full_text,
"source_url":
self.build_post_url(tweet.id),
"media_url":
tweet.extended_entities["media"][0]["media_url_https"],
})
df = pd.DataFrame(data)
return df
def parse_data(self, soup: BeautifulSoup) -> pd.Series:
# Get path to newest pdf
pdf_path = self._parse_last_pdf_link(soup)
# Get text from pdf
text = self._extract_text_from_pdf(pdf_path)
# Get vaccine table from text
df_vax = self._parse_vaccines_table_as_df(text)
people_vaccinated = df_vax.doses_1.sum()
people_fully_vaccinated = df_vax.doses_2.sum()
total_vaccinations = people_vaccinated + people_fully_vaccinated
vaccine = ", ".join(df_vax.vaccine.map(vaccines_mapping))
# Get date
regex = r"Situation Report\s+([\d\.]{10})"
date = re.search(regex, text).group(1)
date = clean_date(date, "%d.%m.%Y")
# Build data series
return pd.Series(
data={
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
"source_url": pdf_path,
"vaccine": vaccine,
"location": self.location,
})
def read(source: str) -> pd.Series:
op = Options()
op.add_argument("--headless")
with webdriver.Chrome(options=op) as driver:
driver.get(source)
time.sleep(3)
for h5 in driver.find_elements_by_tag_name("h5"):
if "Primera dosis" in h5.text:
people_vaccinated = clean_count(
h5.find_element_by_xpath("./preceding-sibling::div").text)
elif "Total dosis aplicadas" in h5.text:
total_vaccinations = clean_count(
h5.find_element_by_xpath("./preceding-sibling::div").text)
elif "Población completamente vacunada" in h5.text:
people_fully_vaccinated = clean_count(
h5.find_element_by_xpath("./preceding-sibling::div").text)
elif "Acumulados al" in h5.text:
date = clean_date(h5.text, "Acumulados al %d de %B de %Y",
"es")
data = {
"date": date,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"total_vaccinations": total_vaccinations,
}
return pd.Series(data=data)
def connect_parse_data(source: str) -> pd.Series:
op = Options()
op.add_argument("--headless")
with webdriver.Chrome(options=op) as driver:
driver.get(source)
time.sleep(10)
date = driver.find_element_by_class_name(
"as_of").find_element_by_tag_name("span").text
date = clean_date(date, "%d.%m.%Y")
for elem in driver.find_elements_by_class_name("counter_block"):
if "1 ДОЗУ" in elem.text:
people_vaccinated = elem.find_element_by_tag_name("h2").text
if "2 ДОЗИ" in elem.text:
people_fully_vaccinated = elem.find_element_by_tag_name(
"h2").text
data = {
"people_vaccinated": clean_count(people_vaccinated),
"people_fully_vaccinated": clean_count(people_fully_vaccinated),
"date": date,
}
return pd.Series(data=data)
def connect_parse_data(source: str, source_old: str) -> pd.Series:
op = Options()
op.add_argument("--headless")
with webdriver.Chrome(options=op) as driver:
driver.get(source)
time.sleep(5)
total_vaccinations = driver.find_element_by_id("counter1").text
people_vaccinated = driver.find_element_by_id("counter2").text
people_fully_vaccinated = driver.find_element_by_id("counter3").text
driver.get(source_old)
time.sleep(5)
# Sanity check
total_vaccinations_old = driver.find_element_by_id("counter1").text
if total_vaccinations != total_vaccinations_old:
raise ValueError(
"Both dashboards may not be synced and hence may refer to different timestamps. Consider"
"Introducing the timestamp manually.")
date = driver.find_element_by_id("pupdateddate").text
date = clean_date(date, "Updated %d %b, %Y")
data = {
"total_vaccinations": clean_count(total_vaccinations),
"people_vaccinated": clean_count(people_vaccinated),
"people_fully_vaccinated": clean_count(people_fully_vaccinated),
"date": date,
}
return pd.Series(data=data)
def _propose_df(self):
regex = r"COVID-19 update: As at (\d{1,2} [a-zA-Z]+ 202\d), .* a total of ([\d ]+) people have been vaccinated"
data = []
for tweet in self.tweets:
match = re.search(regex, tweet.full_text)
if match:
dt = clean_date(match.group(1), "%d %B %Y")
total_vaccinations = clean_count(match.group(2))
dt = tweet.created_at.strftime("%Y-%m-%d")
if self.stop_search(dt):
break
data.append({
"date":
dt,
"people_vaccinated":
total_vaccinations,
"text":
tweet.full_text,
"source_url":
self.build_post_url(tweet.id),
"media_url":
tweet.entities["media"][0]["media_url_https"]
if "media" in tweet.entities else None,
})
return pd.DataFrame(data)
def _parse_data(self, worksheet):
for row in worksheet.values():
for value in row:
if "Total dosis aplicadas al " in str(value):
total_vaccinations = row[-1]
date_raw = re.search(r"[\d-]{10}$", value).group(0)
date_str = clean_date(date_raw, "%d-%m-%Y")
elif value == "Esquemas completos segundas + únicas dosis":
people_fully_vaccinated = row[-1]
elif value == "Total únicas dosis acumuladas":
unique_doses = row[-1]
if total_vaccinations is None or people_fully_vaccinated is None:
raise ValueError(
"Date is not where it is expected be! Check worksheet")
return pd.Series({
"date":
date_str,
"total_vaccinations":
total_vaccinations,
"people_fully_vaccinated":
people_fully_vaccinated,
"people_vaccinated":
total_vaccinations - people_fully_vaccinated + unique_doses,
})
def parse_date(soup: BeautifulSoup) -> str:
for h3 in soup.find_all("h3"):
if "Vaccination Data" in h3.text:
break
date = re.search(r"as of (\d+ \w+ \d+)", h3.text).group(1)
date = clean_date(date, "%d %b %Y")
return date
def parse_date(filename):
# Read pdf (for date)
with open(filename, mode="rb") as f:
reader = PyPDF2.PdfFileReader(f)
page = reader.getPage(0)
text = page.extractText()
# Get date
date_str = re.search(r"\n(?P<count>\d{1,2}.\d{1,2}.\d{4})\n", text).group(1)
return clean_date(date_str, "%d.%m.%Y")
def read(self) -> pd.Series:
data = self._parse_data()
# Build Series
return pd.Series({
"total_vaccinations": data["Doses_Administered"],
"people_vaccinated": data["Administered_Dose1_Recip"],
"people_fully_vaccinated": data["Series_Complete_Yes"],
"date": clean_date(data["Date"], "%Y-%m-%d"),
"vaccine": self._parse_vaccines(data)
})
def _parse_date(self, soup: BeautifulSoup) -> str:
elems = soup.find_all("p")
x = []
for elem in elems:
if elem.find(text=re.compile(self.regex["date"])):
x.append(elem)
if len(x) > 1:
raise ValueError("Format of source has changed")
date_str = clean_date(x[0].text, "ажурирано %d.%m.%Y")
return date_str
def read(self):
data = requests.get(
self.source_url).json()["features"][0]["attributes"]
return pd.Series({
"total_vaccinations":
data["Vaccine_total"],
"people_fully_vaccinated":
data["Vaccine_total_last24"],
"date":
clean_date(datetime.fromtimestamp(data["Date"] / 1000)),
})
def _parse_date(self, driver):
driver.find_element_by_id("tabZoneId87").click()
time.sleep(1)
driver.find_element_by_id("download-ToolbarButton").click()
time.sleep(2)
driver.find_element_by_xpath(
f"//button[contains(text(),'Data')]").click()
time.sleep(4)
window_after = driver.window_handles[1]
driver.switch_to.window(window_after)
time.sleep(2)
date_str = driver.find_element_by_tag_name("tbody").text
return clean_date(date_str, "%m/%d/%Y")
def parse_data(data: dict) -> pd.Series:
date = clean_date(data["updated"], "%Y/%m/%d")
people_vaccinated = data["progress"]
people_fully_vaccinated = data["completed"]
return pd.Series(
data={
"date": date,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"vaccine": ", ".join(_get_vaccine_names(data, translate=True)),
})
def parse_data(soup: BeautifulSoup) -> pd.Series:
numbers = soup.find_all(class_="odometer")
date = re.search(r"[\d\.]{10}", soup.find(class_="counter").text).group(0)
date = clean_date(date, "%d.%m.%Y")
return pd.Series(
data={
"total_vaccinations": int(numbers[0]["data-count"]),
"people_vaccinated": int(numbers[1]["data-count"]),
"people_fully_vaccinated": int(numbers[2]["data-count"]),
"date": date
})
def read(source: str) -> pd.Series:
data = requests.get(source).json()
people_vaccinated = data["topBlock"]["vaccination"]["tot_dose_1"]
people_fully_vaccinated = data["topBlock"]["vaccination"]["tot_dose_2"]
total_vaccinations = data["topBlock"]["vaccination"]["total_doses"]
date = clean_date(data["timestamp"], "%Y-%m-%d %H:%M:%S")
return pd.Series({
"date": date,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"total_vaccinations": total_vaccinations,
})
def parse_data_pdf(self, link) -> dict:
text = self._get_pdf_text(link)
regex = (
r"([\d,]+) people have been vaccinated against COVID-19 as of (\d{1,2})(?:th|nd|st|rd) ([a-zA-Z]+) (202\d)"
)
match = re.search(regex, text)
people_vaccinated = clean_count(match.group(1))
date_raw = " ".join(match.group(2, 3, 4))
date_str = clean_date(date_raw, "%d %B %Y")
return {
"total_vaccinations": people_vaccinated,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": 0,
"date": date_str,
"source_url": link,
}
def parse_data(self, soup: BeautifulSoup) -> pd.Series:
data = {}
match = re.search(self.regex["title"], soup.text)
if match:
# date
date_str = match.group(1)
data["date"] = clean_date(f"{date_str} {datetime.now().year}",
"%d de %B %Y",
lang="es")
# vaccinations
data["total_vaccinations"] = clean_count(match.group(2))
match = re.search(self.regex["data"], soup.text)
if match:
data["people_vaccinated"] = clean_count(match.group(1))
data["people_fully_vaccinated"] = clean_count(match.group(3))
return pd.Series(data)
def parse_date(df: dict) -> str:
# Old
colnames = df.loc[0]
date = df.loc[0, "Unnamed: 1"].replace("Journée du ", "")
# New
# colnames = df.columns
# date = df.columns.str.replace("Journée du ", "").values[0]
_ = [
re.search(r"Journée du (\d{1,2}.\d{1,2}.\d{4})", col)
for col in colnames.astype(str)
]
col = [col for col in _ if col is not None]
if len(col) != 1:
raise ValueError("Something changed in the columns!")
date = clean_date(col[0].group(1), "%d.%m.%Y")
return date
def _propose_df(self):
regex = r"COVID-19 : Vaccination Updates\n\n(\d{1,2}\.\d{1,2}\.202\d).*"
data = []
for tweet in self.tweets:
match = re.search(regex, tweet.full_text)
if match:
dt = clean_date(match.group(1), "%d.%m.%Y")
if self.stop_search(dt):
break
data.append({
"date": dt,
"text": tweet.full_text,
"source_url": self.build_post_url(tweet.id),
"media_url": tweet.entities["media"][0]["media_url_https"] if "media" in tweet.entities else None,
})
return pd.DataFrame(data)
def _propose_df(self):
regex = r"Recevez la situation .* au (\d{1,2} [a-z]+ 202\d)\."
data = []
for tweet in self.tweets:
match = re.search(regex, tweet.full_text)
if match:
dt = clean_date(match.group(1), "%d %B %Y", lang="fr")
if self.stop_search(dt):
break
data.append({
"date": dt,
"text": tweet.full_text,
"source_url": self.build_post_url(tweet.id),
"media_url": tweet.entities["media"][0]["media_url_https"] if "media" in tweet.entities else None,
})
return pd.DataFrame(data)
def parse_data(soup: BeautifulSoup) -> pd.Series:
total_vaccinations = int(soup.find_all(class_="counter")[0].text)
people_vaccinated = int(soup.find_all(class_="counter")[1].text)
people_fully_vaccinated = int(soup.find_all(class_="counter")[2].text)
assert total_vaccinations >= people_vaccinated
assert people_vaccinated >= people_fully_vaccinated
date = soup.find(class_="fuente").text
date = re.search(r"\d{2}-\d{2}-\d{4}", date).group(0)
date = clean_date(date, "%d-%m-%Y")
data = {
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
}
return pd.Series(data=data)
def parse_data(soup: BeautifulSoup) -> pd.Series:
people_vaccinated = int(soup.find_all(class_="count")[0]["data-count"])
people_fully_vaccinated = int(
soup.find_all(class_="count")[1]["data-count"])
assert people_vaccinated >= people_fully_vaccinated
total_vaccinations = people_vaccinated + people_fully_vaccinated
date = soup.find(class_="reportdate").text
date = re.search(r"\d+ \w+ 202\d", date).group(0)
date = clean_date(date, "%d %b %Y")
data = {
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
}
return pd.Series(data=data)
def parse_data(soup: BeautifulSoup) -> pd.Series:
# Get path to newest pdf
links = soup.find(class_="rt-article").find_all("a")
for link in links:
if "sitrep-sl-en" in link["href"]:
pdf_path = "https://www.epid.gov.lk" + link["href"]
break
tf = tempfile.NamedTemporaryFile()
with open(tf.name, mode="wb") as f:
f.write(requests.get(pdf_path).content)
with open(tf.name, mode="rb") as f:
reader = PyPDF2.PdfFileReader(f)
page = reader.getPage(0)
text = page.extractText().replace("\n", "")
covishield_data = re.search(r"Covishield Vaccine +(\d+) (\d+)", text)
covishield_dose1 = clean_count(covishield_data.group(1))
covishield_dose2 = clean_count(covishield_data.group(2))
sinopharm_data = re.search(r"Sinopharm Vaccine +(\d+) (\d+)", text)
sinopharm_dose1 = clean_count(sinopharm_data.group(1))
sinopharm_dose2 = clean_count(sinopharm_data.group(2))
total_vaccinations = covishield_dose1 + covishield_dose2 + sinopharm_dose1 + sinopharm_dose2
people_vaccinated = covishield_dose1 + sinopharm_dose1
people_fully_vaccinated = covishield_dose2 + sinopharm_dose2
regex = r"Situation Report\s+([\d\.]{10})"
date = re.search(regex, text).group(1)
date = clean_date(date, "%d.%m.%Y")
return pd.Series(
data={
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
"source_url": pdf_path,
})
def _parse_data(self, source: str) -> pd.Series:
df = self._get_data_raw(source)
# Parse metrics
total_vaccinations = df.loc["合計", "接種回数"].item()
people_vaccinated = df.loc["合計", "内1回目"].sum()
people_fully_vaccinated = df.loc["合計", "内2回目"].sum()
# Parse date
date = clean_date(
max(dt for dt in df.index.values if isinstance(dt, datetime)))
# Parse vaccines
vaccines = self._parse_vaccines(df)
return pd.Series(
data={
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
"vaccine": vaccines
})
def read(source: str) -> pd.Series:
headers = {
"User-Agent":
"Mozilla/5.0 (Macintosh; Intel Mac OS X 10.16; rv:86.0) Gecko/20100101 Firefox/86.0",
"Accept":
"text/html,application/xhtml+xml,application/xml;q=0.9,image/webp,*/*;q=0.8",
"Accept-Language": "fr,fr-FR;q=0.8,en-US;q=0.5,en;q=0.3",
"Accept-Encoding": "gzip, deflate, br",
"Connection": "keep-alive",
"Upgrade-Insecure-Requests": "1",
"Pragma": "no-cache",
"Cache-Control": "no-cache",
}
soup = BeautifulSoup(
requests.get(source, headers=headers).content, "html.parser")
text = soup.find("div", id="data").find("p").text
date = re.search(r"На сегодня \(([\d\.]{8})\)", text).group(1)
date = clean_date(date, "%d.%m.%y")
people_vaccinated = re.search(
r"([\d\s]+) чел\. \([\d\.]+% от населения[^)]*\) - привито хотя бы одним компонентом вакцины",
text).group(1)
people_vaccinated = clean_count(people_vaccinated)
people_fully_vaccinated = re.search(
r"([\d\s]+) чел\. \([\d\.]+% от населения,?[^)]*\) - полностью привито",
text).group(1)
people_fully_vaccinated = clean_count(people_fully_vaccinated)
total_vaccinations = re.search(r"([\d\s]+) шт\. - всего прививок сделано",
text).group(1)
total_vaccinations = clean_count(total_vaccinations)
return pd.Series({
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
})
def _propose_df(self):
regex = r"VACUNACIÓN #COVID19 \| Reporte del (\d{1,2}\.\d{1,2}\.202\d) - \d{1,2}:\d{1,2}"
data = []
for tweet in self.tweets:
match = re.search(regex, tweet.full_text)
if match:
regex_doses = r"Total Dosis Administradas: ([\d\.]+)"
total_vaccinations = re.search(regex_doses, tweet.full_text)
if total_vaccinations:
total_vaccinations = clean_count(
total_vaccinations.group(1))
else:
total_vaccinations = pd.NA
regex_people = r"Total personas vacunadas: ([\d\.]+)"
people_vaccinated = re.search(regex_people, tweet.full_text)
if people_vaccinated:
people_vaccinated = clean_count(people_vaccinated.group(1))
else:
people_vaccinated = pd.NA
people_fully_vaccinated = total_vaccinations - people_vaccinated
dt = clean_date(match.group(1), "%d.%m.%Y")
if self.stop_search(dt):
break
data.append({
"date":
dt,
"total_vaccinations":
total_vaccinations,
"people_vaccinated":
people_vaccinated,
"people_fully_vaccinated":
people_fully_vaccinated,
"text":
tweet.full_text,
"source_url":
1, #pan.build_post_url(tweet.id),
"media_url":
tweet.extended_entities["media"][0]["media_url_https"],
})
df = pd.DataFrame(data)
return df
def read(source: str) -> pd.Series:
soup = get_soup(source)
counters = soup.find_all(class_="counter")
people_partially_vaccinated = clean_count(counters[0].text)
people_fully_vaccinated = clean_count(counters[1].text)
total_vaccinations = clean_count(counters[2].text)
people_vaccinated = people_partially_vaccinated + people_fully_vaccinated
date = soup.find("span", id="last-update").text
date = re.search(r"\d+.*202\d", date).group(0)
date = clean_date(date, "%d %B, %Y")
data = {
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
"source_url": source,
}
return pd.Series(data=data)
def _propose_df(self):
regex = r"Minister of Health Lizzie Nkosi's #COVID19 update on (\d{1,2} [a-zA-Z]+ 202\d)"
data = []
for tweet in self.tweets:
match = re.search(regex, tweet.full_text)
if match:
dt = clean_date(match.group(1), "%d %B %Y")
if self.stop_search(dt):
break
data.append({
"date":
dt,
"text":
tweet.full_text,
"source_url":
self.build_post_url(tweet.id),
"media_url":
tweet.extended_entities["media"][0]["media_url_https"],
})
df = pd.DataFrame(data)
return df
def connect_parse_data(source: str) -> pd.Series:
soup = get_soup(source)
people_vaccinated = soup.find_all(class_="repart-stlucia")[0].text
people_vaccinated = clean_count(people_vaccinated)
people_fully_vaccinated = soup.find_all(class_="repart-stlucia")[1].text
people_fully_vaccinated = clean_count(people_fully_vaccinated)
total_vaccinations = people_vaccinated + people_fully_vaccinated
date = soup.find(class_="h2-blue").text
date = re.search(r"\w+ +\d+, +202\d", date).group(0)
date = clean_date(date, "%B %d, %Y")
data = {
"total_vaccinations": total_vaccinations,
"people_vaccinated": people_vaccinated,
"people_fully_vaccinated": people_fully_vaccinated,
"date": date,
}
return pd.Series(data=data)
