def test_create_csv_tab_delimited(self):
cleaned_data = self.cleaned_data
cleaned_data['field_delimitor'] = 'TAB'
table = VoucherTable(cleaned_data)
expected = 'Wahlberg\t646\t-'
response = table.create_csv_file()
result = response.content.decode('utf-8')
self.assertTrue(expected in result)
def test_create_csv_other_delimitation(self):
cleaned_data = self.cleaned_data
cleaned_data['field_delimitor'] = 'other symbol'
table = VoucherTable(cleaned_data)
expected = 'Wahlberg,646,-'
response = table.create_csv_file()
result = response.content.decode('utf-8')
self.assertTrue(expected in result)
def test_create_csv_exist_or_empty(self):
cleaned_data = self.cleaned_data
cleaned_data['gene_info'] = 'EXIST OR EMPTY'
table = VoucherTable(cleaned_data)
expected = ',X,-,-'
response = table.create_csv_file()
result = response.content.decode('utf-8')
self.assertTrue(expected in result)
def test_create_csv_accession_number(self):
cleaned_data = self.cleaned_data
cleaned_data['gene_info'] = 'ACCESSION NUMBER'
table = VoucherTable(cleaned_data)
expected = 'AY218269,AY218260'
response = table.create_csv_file()
result = response.content.decode('utf-8')
self.assertTrue(expected in result)
def test_create_csv_number_bases_by_default(self):
cleaned_data = self.cleaned_data
cleaned_data['gene_info'] = ''
table = VoucherTable(cleaned_data)
expected = ',669,1227,412'
response = table.create_csv_file()
result = response.content.decode('utf-8')
self.assertTrue(expected in result)
def test_create_csv_missing_voucher(self):
cleaned_data = self.cleaned_data
cleaned_data['voucher_codes'] = 'CP1000-1000'
table = VoucherTable(cleaned_data)
table.create_csv_file()
expected = 'We don\'t have voucher CP1000-1000 in our database.'
result = table.warnings
self.assertTrue(expected in result)
def setUp(self):
args = []
opts = {'dumpfile': 'test_db_dump.xml', 'verbosity': 0}
cmd = 'migrate_db'
call_command(cmd, *args, **opts)
taxonset = TaxonSets.objects.all()[0]
geneset = GeneSets.objects.all()[0]
self.cleaned_data = {
'collector_info': ['country', 'specific_locality', 'collector'],
'gene_codes': [],
'gene_info': 'NUMBER OF BASES',
'voucher_info': ['code', 'genus', 'species'],
'field_delimitor': 'COMMA',
'taxonset': taxonset,
'voucher_codes': '',
'geneset': geneset,
}
self.table = VoucherTable(self.cleaned_data)
self.maxDiff = None
