def ipl_write(image_in, output):
ipl_write_settings(image_in, output)
print "Writing: ", output
extent = image_in.GetExtent()
voi = vtk.vtkExtractVOI()
voi.SetInput(image_in)
voi.SetVOI(extent[0], extent[1], extent[2], extent[3], extent[4],
extent[5])
writer = vtkn88.vtkn88AIMWriter()
writer.SetInputConnection(voi.GetOutputPort())
writer.SetFileName(output)
writer.Update()
print "Done"
help="Set offset (default: %(default)s)")
parser.add_argument("input")
parser.add_argument("output")
args = parser.parse_args()
input = args.input
output = args.output
dim_num = args.supdim_numbers
test = args.testoff_pixels
pos = args.suppos_pixels_local
dim_pix = args.subdim_pixels
print "Reading: ", input
reader = vtkn88.vtkn88AIMReader()
reader.SetFileName(input)
reader.GlobalWarningDisplayOff()
#reader.DataOnCellsOn()
settings(dim_num, test, pos, dim_pix)
writer = vtkn88.vtkn88AIMWriter()
writer.SetInputConnection(reader.GetOutputPort())
writer.SetFileName(output)
#writer.SetAimOffset( offset[0], offset[1], offset[2] )
writer.Update()
print "Writing: ", output
quit()
cast.SetInput(resliceMask.GetOutput()) cast.SetOutputScalarTypeToChar() cast.Update() # Convert to int8 (i.e. VTK_CHAR) #imageMask.SetScalarTypeToChar() #imageMask.AllocateScalars() #imageMask.Update() # ------------------------------------------------------------------------- # Write out cropped aim outputAimFilePre = os.path.splitext(inputAimFile)[0] + "_PRE.aim" print "Writing to", outputAimFilePre writer = vtkn88.vtkn88AIMWriter() writer.SetInput(image2) writer.SetFileName(outputAimFilePre) writer.Write() # ------------------------------------------------------------------------- # Write out cropped aim mask outputAimFilePreMask = os.path.splitext(inputAimFile)[0] + "_MASK.aim" print "Writing to", outputAimFilePreMask writerMask = vtkn88.vtkn88AIMWriter() writerMask.SetInput(cast.GetOutput()) writerMask.SetFileName(outputAimFilePreMask) writerMask.Write()
