def prepare_data():
""" Method to get configuration data from source files.
Outputs a dictionary of categories as keys and lists of config_options as values
"""
# These variables should point to the configuration files
su2_basedir = os.environ['SU2_HOME']
config_cpp = os.path.join(su2_basedir,'Common/src/config_structure.cpp')
config_hpp = os.path.join(su2_basedir,'Common/include/option_structure.hpp')
# Check that files exist
if not os.path.isfile(config_cpp):
sys.exit('Could not find cpp file, please check that su2_basedir is set correctly in config_gui.py')
if not os.path.isfile(config_hpp):
sys.exit('Could not find hpp file, please check that su2_basedir is set correctly in config_gui.py')
# Run the parser
option_list = parse_config(config_cpp, config_hpp)
# Organize data into dictionary with categories as keys
option_data = {}
for opt in option_list:
if not opt.option_category in option_data:
option_data[opt.option_category] = []
option_data[opt.option_category].append(opt)
return option_data
def main(config_file="config.yml"):
"""
Main function that loads config, sets up logging, and runs evaluation
Args:
config_file (str): path to config file (for logging)
Returns:
None
"""
logger.info("Evaluating")
# load config
logger.info(f"Loading config {config_file}")
config = parse_config(config_file)
logger.info(f"Config: \n{config}")
# log experiment
params = {"param0": np.random.rand()}
metrics = {"metric0": np.random.rand()}
artifacts = {"config_file": config_file}
log_experiment(
params,
metrics,
artifacts,
config["experiment_name"],
os.environ["MLFLOW_TRACKING_URI"],
os.environ["MLFLOW_ARTIFACT_LOCATION"],
)
def prepare_data():
""" Method to get configuration data from source files.
Outputs a dictionary of categories as keys and lists of config_options as values
"""
# These variables should point to the configuration files
su2_basedir = os.environ['SU2_HOME']
config_cpp = os.path.join(su2_basedir, 'Common/src/config_structure.cpp')
config_hpp = os.path.join(su2_basedir,
'Common/include/option_structure.hpp')
# Check that files exist
if not os.path.isfile(config_cpp):
sys.exit(
'Could not find cpp file, please check that su2_basedir is set correctly in config_gui.py'
)
if not os.path.isfile(config_hpp):
sys.exit(
'Could not find hpp file, please check that su2_basedir is set correctly in config_gui.py'
)
# Run the parser
option_list = parse_config(config_cpp, config_hpp)
# Organize data into dictionary with categories as keys
option_data = {}
for opt in option_list:
if not opt.option_category in option_data:
option_data[opt.option_category] = []
option_data[opt.option_category].append(opt)
return option_data
def main(config_file="config.yml"):
"""
Main function that loads config, sets up logging, and runs training
Args:
config_file (str): path to config file (for logging)
Returns:
None
"""
logger.info("Training")
logger.info(f"Loading config {config_file}")
config = parse_config(config_file)
logger.info(f"Config: \n{config}")
def etl(config_file):
"""
ETL function that loads raw data, converts to df, and writes to processed dir.
Args:
config_file (str): path to config file
Returns:
None
"""
# Parse relevant data from config file
config = parse_config(config_file)
raw_data_dir = Path(config["global"]["raw_data_dir"])
processed_data_dir = Path(config["global"]["processed_data_dir"])
# Load dataset and convert to pandas dataframe
logger.info(f"Extract data from CA housing dataset in {raw_data_dir}.")
#data = datasets.fetch_california_housing(data_home=raw_data_dir)
#y = pd.DataFrame(data.target, columns=["MedianHouseValue"])
#X = pd.DataFrame(data.data, columns=data.feature_names)
# Save as parquet file in processed dir
logger.info(f"Write processed data to parquet file in {processed_data_dir}.")
processed_data_dir.mkdir(parents=True, exist_ok=True)
print('Current level of nice:', nice_level)
nice_increment = 19 - nice_level
nice_level = os.nice(nice_increment)
print('Current level of nice:', nice_level)
tile = "DES0453-4457"
tile = "DES2327-5248"
tile = "DES2359+0043"
# File where you want the input coords saved
coord_file = tile + '_' + "test_input.txt"
rcore = "5"
# Folder where you want the output cats saved
outdir = ""
config_file = 'wise2des.cfg'
cfg = parse_config(config_file=config_file, debug=True)
release = cfg.get("des", "release")
datapath = cfg.get("des", "datapath")
tile = None
single = False
args = parse_args(version=None)
checkplots = args.checkplots
saveplots = args.saveplots
nworkers = args.nworkers
nskip = args.skip
modulo = args.modulo
overwrite = args.overwrite
remainder = args.remainder
remainder = min(remainder, modulo - 1)
from TOSSIM import *
from parse_config import *
import sys
small_nodes = 3
small_t, small_r = parse_config("small_linkgain.out", small_nodes, "small.out")
small_t.addChannel("SimpleMessageC", sys.stdout)
#small_t.addChannel("Receive", sys.stdout)
for i in xrange(0, small_nodes):
n = small_t.getNode(i)
n.bootAtTime(1002 * i + 1);
for i in xrange(0, 1000):
small_t.runNextEvent()
def container(pytestconfig):
settings = parse_config(pytestconfig.option.ini_file)
container = create_container(settings)
container.configure()
return container