def makeVmdData(this, simulation = -1): print "Making vmd input files"; path = this.simulations[simulation]; length = this.stateNumbers[simulation]; mdf.makeVmdData(path, length); mdf.combine(path, length);
def makeVmdData(this, simulation = -1, processors = "all"): path = this.simulations[simulation]; length = this.stateNumbers[simulation]; mdf.makeVmdData(path, length); mdf.combine(path, length, processors = processors);