Exemplo n.º 1
0
def test_generate_mrbayes_nexus():

    cmd = TreeingTools.generate_mrbayes_nexus("/path/to/alignment", "/path/to/output")
    checks = [
        "begin mrbayes;",
        "set autoclose=yes nowarn=yes;",
        "execute /path/to/alignment;",
        "prset aamodelpr = mixed;",
        "sump;",
        "sumt;",
    ]
    for check in checks:
        yield ok_, check in cmd, 'Missing: "%s"' % check